PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan015105
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family WRKY
Protein Properties Length: 339aa    MW: 37830.2 Da    PI: 10.2795
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55104955PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-374160997PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.42.2e-31273330359
                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ ed +++++tYegeHnh+
  Aan015105 273 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDSTMLIVTYEGEHNHP 330
                9************************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.6E-17224269IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.809.3E-34259331IPR003657WRKY domain
PROSITE profilePS5081130.159266332IPR003657WRKY domain
SuperFamilySSF1182906.15E-27269331IPR003657WRKY domain
SMARTSM007742.7E-38271331IPR003657WRKY domain
PfamPF031065.1E-27273330IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MEEVEAVNRA AVESCHKMLS LLSQPQDQVQ YKNLMVQTGD AVVRFKKVVS LLDKGVGHAR  60
VRMVKKNPTP IPQNLLLDKP TTIINHQPPK PLQLMLESHP VQEFGSNVVK NTLTLGHQSY  120
HQSPIQIPQN TPHPSSTNYS FLQQQQKLKQ QAEMMYRRSS NSGMSLSSGI SLNFDSSTCT  180
PTMSSNRSFM SSLSIEGSVA NMDGGSFRLI GSSRSADQAT YQHKKRCSVR GDDGSVKCGS  240
SGRCHCSKKR KHRIKRSIKV PAISNKLADI PPDEYSWRKY GQKPIKGSPH PRGYYKCSSM  300
RGCPARKHVE RCLEDSTMLI VTYEGEHNHP RVPVQSTIA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-212673331075WRKY transcription factor 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.85360.0trichome
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023762482.10.0probable WRKY transcription factor 21
SwissprotO043361e-112WRK21_ARATH; Probable WRKY transcription factor 21
TrEMBLA0A2U1QAS30.0A0A2U1QAS3_ARTAN; WRKY domain, Zn-cluster domain protein
STRINGPOPTR_0002s04440.11e-159(Populus trichocarpa)
STRINGPOPTR_0005s24100.11e-160(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.12e-69WRKY DNA-binding protein 39