PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Aan015057 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 254aa MW: 28823.6 Da PI: 8.2969 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.4 | 2.7e-16 | 119 | 167 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 +++GVr +k +g+W+AeIrd + + kr++lg+f taeeA +a++ +++++ Aan015057 119 RFTGVRLRK-WGKWAAEIRDpF-----SkKRIWLGTFLTAEEASRAYVTKKEEFK 167 799****99.**********66.....44*******************9998875 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 6.97E-21 | 118 | 159 | No hit | No description |
SMART | SM00380 | 2.6E-12 | 119 | 165 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.88E-15 | 119 | 166 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 17.649 | 119 | 176 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.3E-8 | 119 | 165 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.5E-19 | 119 | 160 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.1E-8 | 120 | 131 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.1E-8 | 142 | 158 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 254 aa Download sequence Send to blast |
PPKLNQIMSD YNNPNNRLTK RFKQTIINKQ QSQFTGKNLR KIRVICSDPE ATDSSSDESD 60 DVTITNRKPR SPRRIVCEIV ISDPNPVDDV MTSKDDVMTC KDDVIMEENN KQKEFNKKRF 120 TGVRLRKWGK WAAEIRDPFS KKRIWLGTFL TAEEASRAYV TKKEEFKARM LASGRPDPVC 180 EIENPEIEAS KALQSMKYGK RVGLETGSGS GQGSDVEEEN KPPWKGMGVD MLVIDNNGNL 240 MGEFSKLDGD LNIE |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_022024029.1 | 4e-65 | ethylene-responsive transcription factor ERF117-like | ||||
TrEMBL | A0A251RQI1 | 9e-64 | A0A251RQI1_HELAN; Putative DNA-binding domain-containing protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G49120.1 | 4e-17 | ERF family protein |