PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan014545 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | ERF | ||||||||
Protein Properties | Length: 227aa MW: 25284.8 Da PI: 5.77 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.3 | 6.1e-21 | 25 | 74 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a++aa+++l+g Aan014545 25 RYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAALSLRG 74 59*******.**********883....5*************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 3.77E-19 | 25 | 82 | No hit | No description |
Pfam | PF00847 | 1.1E-13 | 25 | 74 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 8.5E-36 | 25 | 88 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.2E-31 | 25 | 82 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.29E-22 | 25 | 83 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 23.67 | 25 | 82 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 7.4E-11 | 26 | 37 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 7.4E-11 | 48 | 64 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence Send to blast |
MPRGRPTTGA ATTKPDVPGS GPDIRYRGVR KRPWGRYAAE IRDPWKKTRV WLGTFDSAED 60 AARAYDAAAL SLRGPKARTN FAFHTTEPIN GINNNGNNNY YQYHNNSLLS YNNGLNQVPG 120 EYQNNNIVRP TCSSLSSTLE SFSGPRPMTT NNVVRLAQRQ EESRRRVDDC RSDCDSSSSV 180 VDDDDGVLGH EDGVVCSSFS KPFLSFDLNM PPPFEEDDDI DCTVLRL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 4e-20 | 26 | 81 | 3 | 59 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
5wx9_A | 6e-20 | 25 | 81 | 14 | 71 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024977384.1 | 2e-54 | ethylene-responsive transcription factor 3 | ||||
TrEMBL | A0A2U1MSW4 | 1e-121 | A0A2U1MSW4_ARTAN; AP2/ERF domain-containing protein | ||||
STRING | PGSC0003DMT400037359 | 3e-48 | (Solanum tuberosum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 7e-23 | ethylene responsive element binding factor 3 |