PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan014419
Common NameERF5
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 275aa    MW: 30453 Da    PI: 7.5046
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55116013PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-32303PU_refplantGDBView CDS
PUT-183a-Artemisia_annua-32305PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.3e-20122172255
        AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+++AeIrdp   + k +r++lg+f ta eAaka+++a+ kl+g
  Aan014419 122 HYRGVRQRP-WGKFAAEIRDP---NkKGTRVWLGTFETAIEAAKAYDRAAFKLRG 172
                8********.**********9...4345*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.9E-33121181IPR001471AP2/ERF domain
CDDcd000188.15E-33121180No hitNo description
PfamPF008472.3E-14122172IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-23122182IPR016177DNA-binding domain
SMARTSM003807.4E-38122186IPR001471AP2/ERF domain
PROSITE profilePS5103224.184122180IPR001471AP2/ERF domain
PRINTSPR003671.1E-13123134IPR001471AP2/ERF domain
PRINTSPR003671.1E-13162182IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MSFTNESSTL DLIRQHLLID DQSFLQTYSL SFENNSIKTE FANKSCFGHN LETSNSTTSN  60
SNTNNTLSNE SVVSNCTSTT SNNSSFKERK RSLNISNISI PFPPPAAVKE TVKLEEFEER  120
KHYRGVRQRP WGKFAAEIRD PNKKGTRVWL GTFETAIEAA KAYDRAAFKL RGSKAILNFP  180
LEIGYSAAPP HGVTITSRKR AAEEIEVESV RKEPKVEPVT AEFDGVKTDN GVVPLTPSSW  240
TAVWDFGDGN GKGIFEVPPL SPYPNMNFSS GCIVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A9e-33121183163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.23260.0leaf| trichome
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, mostly in root tip and lateral root tips. {ECO:0000269|PubMed:10945353}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional activator (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethylene. {ECO:0000269|PubMed:10945353}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023753238.11e-101ethylene-responsive transcription factor 5-like
SwissprotQ9LW483e-65ERF5_NICSY; Ethylene-responsive transcription factor 5
TrEMBLM4IVT20.0M4IVT2_ARTAN; Ethylene-responsive transcription factor 5
STRINGXP_009609460.11e-64(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.13e-51ERF family protein
Publications ? help Back to Top
  1. Lu X, et al.
    AaORA, a trichome-specific AP2/ERF transcription factor of Artemisia annua, is a positive regulator in the artemisinin biosynthetic pathway and in disease resistance to Botrytis cinerea.
    New Phytol., 2013. 198(4): p. 1191-202
    [PMID:23448426]