PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan014285
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 189aa    MW: 21138.2 Da    PI: 7.3602
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-212160992PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.5e-182675255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr ++ +g+Wv+eIr p++   + r++lg+f tae+Aa+a++ a+++++g
  Aan014285 26 VYRGVRMRS-WGKWVSEIRQPRK---KSRIWLGTFSTAEMAARAHDVAALSIKG 75
               59****998.**********843...6***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003804.5E-362689IPR001471AP2/ERF domain
PfamPF008474.4E-122675IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-322684IPR001471AP2/ERF domain
PROSITE profilePS5103223.2352683IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-212684IPR016177DNA-binding domain
PRINTSPR003675.0E-112738IPR001471AP2/ERF domain
CDDcd000181.00E-322783No hitNo description
PRINTSPR003675.0E-114965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MAETNQSLNS KTRPKPIISK KQRPQVYRGV RMRSWGKWVS EIRQPRKKSR IWLGTFSTAE  60
MAARAHDVAA LSIKGKAAVL NFPQLKDLLP RAVSLDPLDI RAAAVKAATM QELNMDLYDE  120
VAEDLVENKC DSSDELGQII ELPSLEGLDS RPGSLAKFMV VDSVDGWMYP FDGFSSSDFA  180
DQMVKELSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1927881577Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023761683.12e-65dehydration-responsive element-binding protein 3-like
SwissprotQ9LYD34e-47DREB3_ARATH; Dehydration-responsive element-binding protein 3
TrEMBLA0A2U1KS471e-134A0A2U1KS47_ARTAN; Integrase-type DNA-binding superfamily protein
STRINGGorai.003G063500.12e-55(Gossypium raimondii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-49ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Galuschka C,Schindler M,Bülow L,Hehl R
    AthaMap web tools for the analysis and identification of co-regulated genes.
    Nucleic Acids Res., 2007. 35(Database issue): p. D857-62
    [PMID:17148485]