PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan014238 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | ERF | ||||||||||||
Protein Properties | Length: 204aa MW: 22367.3 Da PI: 5.2503 | ||||||||||||
Description | ERF family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.3 | 2.5e-15 | 49 | 97 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 y+G+r + g+Wv+eIr+p + r++lg++ t+e+Aa+a++ a+++l+g Aan014238 49 VYHGIRLR--AGKWVSEIREP-----NkpSRIWLGTYPTPEMAAAAYDVAALALKG 97 7999*875..6*********9.....448************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 1.8E-25 | 49 | 107 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.57E-17 | 49 | 107 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 6.3E-25 | 49 | 111 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.887 | 49 | 105 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 9.0E-9 | 49 | 97 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.26E-14 | 50 | 107 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence Send to blast |
XDIQPRYNKT LYCMANYSRR RNSSASQQPE NNNNNPPVTA GSSSTRHTVY HGIRLRAGKW 60 VSEIREPNKP SRIWLGTYPT PEMAAAAYDV AALALKGTDT KLNFPDSILS NTLPECPTTD 120 EIRAAAARAA AARDPTNQSG YGSSSGIGTN PHDQYMDHED VFGMPNMLSD MAEGMLLSPP 180 RINSSPPDDG TDYNYSGGEN LWDY |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Aan.5050 | 0.0 | trichome |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023754821.1 | 1e-75 | ethylene-responsive transcription factor ERF024-like | ||||
Swissprot | Q9FJ90 | 2e-38 | ERF25_ARATH; Ethylene-responsive transcription factor ERF025 | ||||
TrEMBL | M4IWN6 | 1e-138 | M4IWN6_ARTAN; Ethylene-responsive transcription factor 8 | ||||
STRING | VIT_16s0100g00400.t01 | 3e-47 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 2e-33 | ERF family protein |
Publications ? help Back to Top | |||
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