PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan014220

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

WRKY

Protein Properties

Length: 337aa MW: 36605.5 Da PI: 9.2304

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S56473076	PU_unref	Unigene	View CDS
PUT-183a-Artemisia_annua-10052	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.9	1.3e-30	80	139	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ Aan014220 80 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGNHNHP 139 58*************************99**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	5.5E-33	65	141	IPR003657	WRKY domain
SuperFamily	SSF118290	6.28E-28	73	141	IPR003657	WRKY domain
PROSITE profile	PS50811	29.298	75	141	IPR003657	WRKY domain
SMART	SM00774	2.2E-37	80	140	IPR003657	WRKY domain
Pfam	PF03106	3.0E-27	81	139	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence Send to blast
LGLSLRIQSN TTTAQHVRDH QEGNHESATR FMPMQQSNLI NPGNFSGDIK SNNIANNPIA 60 SLPNRKARVS VRARCEAATM NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVQR 120 CLEDMSILIT TYEGNHNHPL PVGATAMAST TSAAAASFML LDSNNHISSE SGALNQSPFN 180 NYHMSSNIMN PNYSPYSSTH VRSMNPNDHS KGIVFDLTNN PMNPHHIPNS SNAPQLGFPW 240 MPNKVPNGSQ FLRSRQVDGT SGVWEGGEDS NHNNNNNNKS ILAENMSAIA SHPNFRVAVA 300 AAISSIINKE SQTTNNIHAD GPKDRESGGS SSGGKAW

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2ayd_A	3e-22	67	143	1	76	WRKY transcription factor 1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024980454.1	0.0	probable WRKY transcription factor 9
TrEMBL	A0A2U1NZ39	0.0	A0A2U1NZ39_ARTAN; WRKY domain-containing protein
STRING	VIT_12s0055g00340.t01	5e-88	(Vitis vinifera)
STRING	EMJ25350	1e-87	(Prunus persica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	2e-59	WRKY DNA-binding protein 9