PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan013789

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

HD-ZIP

Protein Properties

Length: 199aa MW: 22828.7 Da PI: 8.6891

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-82764	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.3	3e-19	45	96	5	56
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ft++q++ Le+ F++++++ +++ +LAk lgL+ rqV +WFqN+Ra++k Aan013789 45 RRFTNQQIKSLETIFQSESKLEPRKKLQLAKDLGLQPRQVAIWFQNKRARWK 96 69*************************************************9 PP
2	HD-ZIP_I/II	120.8	7.2e-39	44	134	3	93
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +rr++++q+k+LE+ F++e+kLep++K +la++Lglqprqva+WFqn+RAR+k+kqlE+dy+ L+++yd+l+++ + L++e+++L+ +l++ Aan013789 44 QRRFTNQQIKSLETIFQSESKLEPRKKLQLAKDLGLQPRQVAIWFQNKRARWKSKQLERDYNILRANYDSLASKFDILNRENQSLTLQLQK 134 79************************************************************************************99986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	4.71E-19	19	100	IPR009057	Homeodomain-like
PROSITE profile	PS50071	17.41	38	98	IPR001356	Homeobox domain
SMART	SM00389	3.4E-15	41	102	IPR001356	Homeobox domain
CDD	cd00086	8.82E-14	42	99	No hit	No description
Pfam	PF00046	9.9E-17	45	96	IPR001356	Homeobox domain
Gene3D	G3DSA:1.10.10.60	3.2E-19	45	105	IPR009057	Homeodomain-like
PRINTS	PR00031	1.2E-5	69	78	IPR000047	Helix-turn-helix motif
PROSITE pattern	PS00027	0	73	96	IPR017970	Homeobox, conserved site
PRINTS	PR00031	1.2E-5	78	94	IPR000047	Helix-turn-helix motif
Pfam	PF02183	1.4E-16	98	137	IPR003106	Leucine zipper, homeobox-associated

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence Send to blast
XTTTXPPWAH SSLENMLDLG SDPDSDCFTT FFNTLSNNKD NKIQRRFTNQ QIKSLETIFQ 60 SESKLEPRKK LQLAKDLGLQ PRQVAIWFQN KRARWKSKQL ERDYNILRAN YDSLASKFDI 120 LNRENQSLTL QLQKLHEVID KKEKICSTHE NSKDSTEEKV SEKGLGNVSD ADSSMKQEYP 180 EHNGPHLSKS SSSSSSPPX

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Widely expressed. {ECO:0000269\|PubMed:16055682, ECO:0000269\|PubMed:8771791}.

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription activator that may act as growth regulators in response to water deficit. {ECO:0000269\|PubMed:15604708, ECO:0000269\|PubMed:8771791}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By water deficit, by abscisic acid (ABA) and by salt stress. {ECO:0000269\|PubMed:16055682, ECO:0000269\|PubMed:8771791}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022035645.1	6e-71	homeobox-leucine zipper protein ATHB-7-like
Swissprot	P46897	1e-44	ATHB7_ARATH; Homeobox-leucine zipper protein ATHB-7
TrEMBL	A0A2U1KG79	1e-117	A0A2U1KG79_ARTAN; HD-ZIP protein
STRING	XP_002529960.1	4e-50	(Ricinus communis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	1e-46	homeobox 7

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Zhou SF, et al. Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis. New Phytol., 2015. 208(1): p. 188-97 [PMID:25919792]