PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||||||
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TF ID | Aan013733 | ||||||||||||||||
Organism | |||||||||||||||||
Taxonomic ID | |||||||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | ERF | ||||||||||||||||
Protein Properties | Length: 216aa MW: 23304.2 Da PI: 10.454 | ||||||||||||||||
Description | ERF family protein | ||||||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.4 | 5.6e-21 | 25 | 75 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a+++a+++++g Aan013733 25 TRYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDNAAREFRG 75 68********.**********8...557************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 3.1E-14 | 25 | 75 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 9.04E-32 | 25 | 84 | No hit | No description |
SuperFamily | SSF54171 | 1.24E-22 | 26 | 84 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 24.21 | 26 | 83 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.5E-32 | 26 | 83 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.6E-37 | 26 | 89 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-11 | 27 | 38 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-11 | 49 | 65 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence Send to blast |
PPTQNKWLLA VNLTPPPLPA APPRTRYRGV RKRPWGRYAA EIRDPGKKSR VWLGTFDTAE 60 EAARAYDNAA REFRGDKAKT NFPAGMKNYG KNNNKSPSGE SSTVESSQTA AAVPLAASAA 120 ALDLSLSHFP VGFPVAHSLF LYQSSSNMLR FNGSVVNRKP NVTISAAATA AVQSDSDSSS 180 VVNISYNNNN NSDRKKTIAF DIDLNLPPPE AVSLML |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 3e-21 | 26 | 83 | 14 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Aan.321 | 0.0 | leaf| trichome |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023772883.1 | 5e-66 | ethylene-responsive transcription factor 4-like | ||||
TrEMBL | A0A2J6KTR3 | 1e-64 | A0A2J6KTR3_LACSA; Uncharacterized protein | ||||
STRING | Solyc10g009110.1.1 | 5e-43 | (Solanum lycopersicum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15210.1 | 7e-23 | ethylene responsive element binding factor 4 |