PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan013676
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 303aa    MW: 33752.8 Da    PI: 5.5716
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41965053PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-63923PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.81.5e-164594255
               HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
               r +h+e E+rRR++iN++f+ Lr+l+P++    ++K + a+ L ++++YI+ Lq
  Aan013676 45 RSKHSETEQRRRSKINERFQHLRDLIPQN----DQKTDRASFLLEVIQYIHFLQ 94
               899*************************9....9******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-1841112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.4E-2241114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.6664393IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.94E-174598No hitNo description
PfamPF000104.2E-144594IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-134999IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MVRTVKNYQQ QQQEDYEVDD VVDGDYISNT STSSHKDGSK ATSHRSKHSE TEQRRRSKIN  60
ERFQHLRDLI PQNDQKTDRA SFLLEVIQYI HFLQEKLQVY EGTCQGWSPE MTKLLGGNYG  120
ADNYPGQLQP ARNGSVYESN VIPTPLPLTN AQNLVEPDVS GSTAFQTTDR NTYEAEPSHT  180
HQGSFPDVEL LASQSRPPTW NAGQSCTPSE LEESSLSNAY SKGLLNNITQ ALGSSGVDLS  240
QASISVQFDI KKRTSSGETS TPLRFEDHNL LSSGNQAMGH CAVRSRDDVS DQVHKKARTE  300
QSQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024975317.11e-133transcription factor BIM2-like isoform X1
TrEMBLA0A103Y5001e-126A0A103Y500_CYNCS; Myc-type, basic helix-loop-helix (BHLH) domain-containing protein
STRINGXP_006482443.14e-74(Citrus sinensis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-41BES1-interacting Myc-like protein 2