PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan013343

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Nin-like

Protein Properties

Length: 422aa MW: 47120.6 Da PI: 9.7449

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-124766	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	34.2	5e-11	151	197	4	48
RWP-RK 4 eisledlskyFs..lpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 ++++e ++k+ + +pi +AAk+Lgv+ ++LKr CR + + WP k Aan013343 151 SLTMEAVNKHVDvgKPIDEAAKSLGVSRSTLKRFCRDHDMTSWPLPK 197 6788888887652269****************************765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	12.002	136	221	IPR003035	RWP-RK domain
Gene3D	G3DSA:1.10.10.60	8.4E-6	144	185	IPR009057	Homeodomain-like
Pfam	PF02042	6.0E-11	152	199	IPR003035	RWP-RK domain
SuperFamily	SSF54277	1.31E-15	335	405	No hit	No description
PROSITE profile	PS51745	20.662	339	420	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	2.2E-16	339	416	No hit	No description
SMART	SM00666	4.7E-12	339	420	IPR000270	PB1 domain
Pfam	PF00564	2.9E-14	340	405	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence Send to blast
EMASVFELGD KSLIQVVGPS REASSLFLNT DPQSTIISST ITTKTKIPEM VSSDSESFVA 60 DLAKTDSTHV LNQLSPKQED FLDNNGGTIT SSAIVIQDDV IRDDIDVVDA GNDENAASNH 120 DVSMQIASNT VTGTRETSNR MKRGRKRKID SLTMEAVNKH VDVGKPIDEA AKSLGVSRST 180 LKRFCRDHDM TSWPLPKHNK KTARVTDSKL SQKSTSIKPL QGSSSVRFGF FGVVILLVRV 240 KRWSCLSKNH GFSGKWWSCG KHSYLPFKLD SMYQVARLML SLKRWKNKNS IRHAMQNRDH 300 LTDSTEKPKN ETNIINPGSS PVYVSPKQIV ARVVSDIKKV TVKATFKDDI IKFQLPTSSG 360 LFELENEVAQ RIKLQNKRVR LKYRDEDDDM ILLACDADLH NLLGNSPSNN CIIKLSIQLV 420 DE

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence Send to blast

EMASVFELGD KSLIQVVGPS REASSLFLNT DPQSTIISST ITTKTKIPEM VSSDSESFVA  60
DLAKTDSTHV LNQLSPKQED FLDNNGGTIT SSAIVIQDDV IRDDIDVVDA GNDENAASNH  120
DVSMQIASNT VTGTRETSNR MKRGRKRKID SLTMEAVNKH VDVGKPIDEA AKSLGVSRST  180
LKRFCRDHDM TSWPLPKHNK KTARVTDSKL SQKSTSIKPL QGSSSVRFGF FGVVILLVRV  240
KRWSCLSKNH GFSGKWWSCG KHSYLPFKLD SMYQVARLML SLKRWKNKNS IRHAMQNRDH  300
LTDSTEKPKN ETNIINPGSS PVYVSPKQIV ARVVSDIKKV TVKATFKDDI IKFQLPTSSG  360
LFELENEVAQ RIKLQNKRVR LKYRDEDDDM ILLACDADLH NLLGNSPSNN CIIKLSIQLV  420
DE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021976530.1	1e-134	protein NLP7-like
TrEMBL	A0A2U1PDS3	0.0	A0A2U1PDS3_ARTAN; NIN-like protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	6e-17	NIN like protein 7