PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan012901 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | ERF | ||||||||
Protein Properties | Length: 69aa MW: 7885.02 Da PI: 11.2735 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.5 | 2.2e-20 | 6 | 55 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrd ++ ++r++lg+f+t+eeAa a+ a+++l+g Aan012901 6 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYAGAARSLRG 55 7********.**********883....5*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 4.3E-13 | 6 | 55 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.3E-30 | 6 | 69 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.18E-18 | 6 | 62 | No hit | No description |
PROSITE profile | PS51032 | 20.56 | 6 | 63 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.38E-21 | 6 | 63 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.9E-29 | 6 | 62 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.6E-11 | 7 | 18 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.6E-11 | 29 | 45 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 69 aa Download sequence Send to blast |
MASPNHYRGV RKRPWGRYAA EIRDPWKKTR VWLGTFDTPE EAALAYAGAA RSLRGPKAKT 60 TFLLHHSPH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 8e-20 | 2 | 64 | 1 | 64 | ATERF1 |
3gcc_A | 8e-20 | 2 | 64 | 1 | 64 | ATERF1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023736733.1 | 2e-35 | ethylene-responsive transcription factor 12-like | ||||
Swissprot | Q94ID6 | 1e-31 | ERF81_ARATH; Ethylene-responsive transcription factor 12 | ||||
TrEMBL | A0A2J6K8Z6 | 5e-34 | A0A2J6K8Z6_LACSA; Uncharacterized protein | ||||
STRING | evm.model.supercontig_27.18 | 3e-31 | (Carica papaya) | ||||
STRING | cassava4.1_018002m | 3e-31 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28360.1 | 2e-27 | ERF domain protein 12 |