PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan011619 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | Trihelix | ||||||||
Protein Properties | Length: 122aa MW: 14006 Da PI: 8.9768 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 64.4 | 2.5e-20 | 25 | 116 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqlea 87 +W+++e l+Li+a+r+++++lrrg+l+ ++W++v++ + +++ qC++k+e+l++ry+ +k++e + + +s++ yf+ +ea Aan011619 25 CWSQEEALVLIQAYRDRWHALRRGCLRTADWDAVAEELgricPGVTPPKTSAQCRHKMEKLRQRYRVEKQREMSFgGGQFVSNWFYFEAMEA 116 8*************************************664334444899*********************9997568999*********85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51029 | 9.002 | 14 | 122 | IPR006578 | MADF domain |
Pfam | PF13837 | 4.5E-18 | 25 | 117 | No hit | No description |
PROSITE profile | PS50090 | 6.644 | 26 | 86 | IPR017877 | Myb-like domain |
SMART | SM00595 | 2.5E-14 | 33 | 122 | IPR006578 | MADF domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence Send to blast |
MSGNGIIISG NGGDTKPPRK FPPLCWSQEE ALVLIQAYRD RWHALRRGCL RTADWDAVAE 60 ELGRICPGVT PPKTSAQCRH KMEKLRQRYR VEKQREMSFG GGQFVSNWFY FEAMEALESR 120 DT |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023758932.1 | 2e-57 | uncharacterized protein DDB_G0283697 | ||||
Refseq | XP_024994561.1 | 6e-58 | protein FIP2 isoform X2 | ||||
TrEMBL | A0A141FQK1 | 1e-82 | A0A141FQK1_CHRMO; Trihelix protein (Fragment) | ||||
TrEMBL | A0A2U1QHZ0 | 3e-84 | A0A2U1QHZ0_ARTAN; Trihelix protein | ||||
STRING | Solyc08g007170.1.1 | 1e-39 | (Solanum lycopersicum) | ||||
STRING | PGSC0003DMT400052836 | 1e-39 | (Solanum tuberosum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44730.1 | 5e-37 | Trihelix family protein |