PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan011350 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | MYB_related | ||||||||||||
Protein Properties | Length: 131aa MW: 14819.4 Da PI: 9.1617 | ||||||||||||
Description | MYB_related family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.9 | 4.2e-17 | 76 | 121 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ Aan011350 76 RGHWKPVEDAKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 121 899*****************************.***********996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 22.668 | 71 | 126 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 3.07E-16 | 74 | 129 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 2.4E-14 | 75 | 124 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 1.2E-16 | 76 | 121 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 3.2E-22 | 77 | 131 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 2.53E-13 | 79 | 120 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence Send to blast |
MYTQYHNYHH HNLASASSSS SSLSNDHSIL RNLHGNDQDH GHGTDEGINL TLKSNIDSHD 60 HNGGIRPCGQ LRTSARGHWK PVEDAKLKEL VALYGPQNWN LIAEKLEGRS GKSCRLRWFN 120 QLDPRINKKA F |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in organ boundaries. {ECO:0000269|PubMed:19542355}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that involved in boundary specification, meristem initiation and maintenance, and organ patterning. Functions in both lateral organ separation and axillary meristem formation. {ECO:0000269|PubMed:19542355}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021998624.1 | 2e-42 | transcription factor MYB105-like | ||||
Swissprot | Q9SEZ4 | 9e-33 | MY105_ARATH; Transcription factor MYB105 | ||||
TrEMBL | A0A2U1KFX8 | 1e-90 | A0A2U1KFX8_ARTAN; Homeodomain-like protein | ||||
STRING | evm.model.supercontig_1.43 | 2e-34 | (Carica papaya) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 1e-34 | myb domain protein 105 |
Publications ? help Back to Top | |||
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