PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan011127
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family TALE
Protein Properties Length: 138aa    MW: 16230.3 Da    PI: 9.6822
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41953916PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox32.11.9e-1063982055
               HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
   Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55
               +k +yps++e+  LA+++gL+++q+ +WF N+R ++
  Aan011127 63 YKWPYPSESEKVALAESTGLDQKQINNWFINQRKRH 98
               5679*****************************985 PP
2ELK39.71e-131839122
        ELK  1 ELKhqLlrKYsgyLgsLkqEFs 22
               ELK++LlrKYsgyL+sLkqE+s
  Aan011127 18 ELKNHLLRKYSGYLSSLKQELS 39
               9*******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5121311.2961838IPR005539ELK domain
PfamPF037896.8E-111839IPR005539ELK domain
SMARTSM011883.5E-71839IPR005539ELK domain
PROSITE profilePS5007113.08638101IPR001356Homeobox domain
SuperFamilySSF466895.99E-2139114IPR009057Homeodomain-like
SMARTSM003892.4E-1340105IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.4E-2843104IPR009057Homeodomain-like
CDDcd000863.33E-1250102No hitNo description
PfamPF059202.2E-175897IPR008422Homeobox KN domain
PROSITE patternPS0002707699IPR017970Homeobox, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
XVGETEVPEI DPRAEDRELK NHLLRKYSGY LSSLKQELSK KKKKGKLPKE ARQKLLSWWE  60
LHYKWPYPSE SEKVALAEST GLDQKQINNW FINQRKRHWK PSEDMQFMVM DGPHPQNAAT  120
ALYMEGHYMG EGPYRLGP
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in the apical meristems, in the newly emerged lateral primordia in the floral bud, in their vascular bundles and in the cortex parenchyma of the floral pedicle. Also present in the lateral tips of leaf primordia.
UniprotTISSUE SPECIFICITY: Expressed only in the stems.
Functional Description ? help Back to Top
Source Description
UniProtAppears to be involved in meristem formation and in the regulation of leaf morphology. Misexpression makes the leaf more compound which is always associated with growth retardation and loss of apical dominance, resulting in dwarfed, bushy plants. Probably binds to the DNA sequence 5'-TGAC-3'.
UniProtProbably binds to the DNA sequence 5'-TGAC-3'.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023731900.15e-84homeotic protein knotted-1 isoform X1
RefseqXP_023731901.14e-84homeotic protein knotted-1 isoform X2
SwissprotO041356e-81KNAP2_MALDO; Homeobox protein knotted-1-like 2
SwissprotQ413304e-81KN1_SOLLC; Homeotic protein knotted-1
TrEMBLA0A2J6KJX91e-82A0A2J6KJX9_LACSA; Uncharacterized protein
STRINGEOY156244e-81(Theobroma cacao)
STRINGXP_002510027.14e-82(Ricinus communis)
STRINGXP_009598343.13e-81(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08150.15e-73KNOTTED-like from Arabidopsis thaliana