PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan011063
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family LBD
Protein Properties Length: 140aa    MW: 15908.1 Da    PI: 8.1221
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55081963PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26027.49.2e-097110296
     DUF260   2 CaaCkvlrrkCakdCvlapyfpa......eqpkkfanvhkl...FGasnvlkllkalpeee..redamsslvyeAearardPvyGavgvilklqqqleql 90 
                C +C +  ++C+++C ++ +fpa      e++++ ++vh l   F  +++l+ l+   ee+   +++++sl+ e +a ++ P     g i +l++qle++
  Aan011063   7 CVVCPL--ENCNPSCLFRLVFPAspmnenEEEENIKCVHLLldyFTKDQLLHSLTLGGEEKvdLKKVVKSLLTETRASLKFPKDRMQGYIASLKSQLEHK 104
                555554..47***********87555543446899999998444666666666666555553369**********************************9 PP

     DUF260  91 kaelal 96 
                ++ +  
  Aan011063 105 QKRVRD 110
                988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031957.5E-613109IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MAEENRCVVC PLENCNPSCL FRLVFPASPM NENEEEENIK CVHLLLDYFT KDQLLHSLTL  60
GGEEKVDLKK VVKSLLTETR ASLKFPKDRM QGYIASLKSQ LEHKQKRVRD LDGQVKGAAE  120
RLAREKSRCT KAFSSMGDSX