PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan010909 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | Dof | ||||||||
Protein Properties | Length: 145aa MW: 16199.7 Da PI: 9.4065 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 83.6 | 2.1e-26 | 4 | 45 | 21 | 62 |
zf-Dof 21 ynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s Aan010909 4 YNNYNFSQPRHFCKGCRRYWTHGGTLRDIPVGGGSRKNAKRS 45 9*************************************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50884 | 20.56 | 1 | 43 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 2.0E-16 | 4 | 43 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.0E-21 | 4 | 43 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence Send to blast |
RSTYNNYNFS QPRHFCKGCR RYWTHGGTLR DIPVGGGSRK NAKRSRLSNT STYASNNNTN 60 VVSSSNHLEF RHMAPPTTTL LAPFGGDHLR MCXEFYVLVE WDYWWFFGFE EGFGRGVWPF 120 HGVGIGGGEG GGYVVVGGGG GYVER |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023759730.1 | 3e-39 | dof zinc finger protein DOF3.4-like | ||||
TrEMBL | A0A2U1KFN2 | 2e-60 | A0A2U1KFN2_ARTAN; Dof zinc finger protein DOF3.4 | ||||
TrEMBL | A0A2U1KLJ5 | 2e-59 | A0A2U1KLJ5_ARTAN; Dof zinc finger protein DOF3.4 | ||||
STRING | Migut.H00486.1.p | 6e-35 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50410.1 | 3e-24 | OBF binding protein 1 |