PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan010876
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 146aa    MW: 15997.1 Da    PI: 8.4715
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55194570PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-73806PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-201060256
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
               +y+GVr ++ +g++vAeIrdp +   ++r++lg+f tae+Aa+a++aa+ +l+ge
  Aan010876 10 RYRGVRKRP-WGKYVAEIRDPLK---KARVWLGTFNTAEDAARAYDAAAINLRGE 60
               59*******.**********743...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.0E-371073IPR001471AP2/ERF domain
PROSITE profilePS5103223.381067IPR001471AP2/ERF domain
CDDcd000185.58E-201066No hitNo description
SuperFamilySSF541717.19E-231068IPR016177DNA-binding domain
PfamPF008475.9E-141060IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-321067IPR001471AP2/ERF domain
PRINTSPR003671.6E-111122IPR001471AP2/ERF domain
PRINTSPR003671.6E-113349IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MPPPSATAIR YRGVRKRPWG KYVAEIRDPL KKARVWLGTF NTAEDAARAY DAAAINLRGE  60
KAKTNFSANF DEEDVLVGQH QHQRPTSSSM SSTVDESLSG PRVPVVVKDK PVVKLKVKPV  120
VVGVGNDDEC CDYCDSSSSV STEFVI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-221166359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A8e-221166662ATERF1
3gcc_A8e-221166662ATERF1
5wx9_A2e-21571976Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways and could also regulate other AtERFs. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:11487705, ECO:0000269|PubMed:9756931}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA), ethylene and Alternaria brassicicola (locally and systemically). Moderate induction by wounding or drought stress does not require EIN2, whereas induction by NaCl does. Transcripts accumulate slightly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by ethylene, exogenous abscisic acid (ABA), cold and heat stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024959998.12e-37ethylene-responsive transcription factor 3-like
SwissprotO803393e-29ERF82_ARATH; Ethylene-responsive transcription factor 3
TrEMBLA0A151SBG63e-35A0A151SBG6_CAJCA; Ethylene-responsive transcription factor 3
STRINGGLYMA08G43300.12e-34(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.12e-21ERF domain protein 11
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]