PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan010476 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | WRKY | ||||||||||||
Protein Properties | Length: 158aa MW: 18108.1 Da PI: 9.6185 | ||||||||||||
Description | WRKY family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 103.2 | 1.5e-32 | 80 | 138 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fpr+YYrCt++gC+vkk+v+r ++d vv++tYeg+H h+ Aan010476 80 LDDGYRWRKYGQKAVKNNKFPRNYYRCTYQGCNVKKQVQRLSNDDGVVVTTYEGTHSHP 138 59********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 8.5E-34 | 65 | 138 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.06E-30 | 72 | 139 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.09 | 75 | 140 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.1E-38 | 80 | 139 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.4E-26 | 81 | 138 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence Send to blast |
MANNNHANDY AGFTEKDHGK YEMFDGVVVD DHVSRASNAL AQGDGNELNV SSGKVNIRKG 60 EKKIKKPKHA FQTRSQVDIL DDGYRWRKYG QKAVKNNKFP RNYYRCTYQG CNVKKQVQRL 120 SNDDGVVVTT YEGTHSHPIE KSTDNFENIL TQMQIYSR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 6e-28 | 70 | 137 | 7 | 74 | Probable WRKY transcription factor 4 |
2lex_A | 6e-28 | 70 | 137 | 7 | 74 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023770722.1 | 7e-84 | probable WRKY transcription factor 75 | ||||
Swissprot | Q9FYA2 | 6e-55 | WRK75_ARATH; Probable WRKY transcription factor 75 | ||||
TrEMBL | A0A2U1MEP9 | 1e-115 | A0A2U1MEP9_ARTAN; WRKY1 | ||||
STRING | XP_004310100.1 | 2e-64 | (Fragaria vesca) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13080.1 | 5e-57 | WRKY DNA-binding protein 75 |