PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan010413 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | ERF | ||||||||||||
Protein Properties | Length: 159aa MW: 17410.1 Da PI: 10.3923 | ||||||||||||
Description | ERF family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.6 | 8.7e-20 | 30 | 79 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae Aa+a+++a+ +++g Aan010413 30 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFETAEAAARAYDRAAIEFRG 79 59*******.**********94....36************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.70E-21 | 29 | 87 | No hit | No description |
SuperFamily | SSF54171 | 8.5E-23 | 30 | 87 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 8.1E-38 | 30 | 93 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.1E-33 | 30 | 88 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 25.501 | 30 | 87 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 6.1E-14 | 30 | 79 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.3E-12 | 31 | 42 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.3E-12 | 53 | 69 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence Send to blast |
XASAGAGAPV QTGVKAGAGA GGPIKKKKKN YRGVRQRPWG KWAAEIRDPR KAARVWLGTF 60 ETAEAAARAY DRAAIEFRGA RAKLNFPSTD YATTQVSSHE NNQPRVQVSS KRKHETSNEK 120 KPSLEKDISV DDSDDWMNLI MNFSDGFHDS TDGGNVWSV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 1e-25 | 27 | 87 | 2 | 63 | ATERF1 |
3gcc_A | 1e-25 | 27 | 87 | 2 | 63 | ATERF1 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Aan.19754 | 0.0 | trichome |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024979087.1 | 5e-45 | uncharacterized protein LOC112516303 | ||||
TrEMBL | A0A2U1PGI1 | 9e-55 | A0A2U1PGI1_ARTAN; AP2/ERF domain-containing protein | ||||
STRING | Lus10014054 | 5e-39 | (Linum usitatissimum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61890.1 | 6e-26 | ERF family protein |