PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan010402
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Nin-like
Protein Properties Length: 160aa    MW: 18318.7 Da    PI: 9.5779
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55158889PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK29.71.3e-092666444
     RWP-RK  4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44
               e+s ed+++++ +++k+AA eLgv+l++LKr+  ++G++ W
  Aan010402 26 ELSREDIEQHYGKTMKKAAEELGVSLSTLKRKHNKLGMPGW 66
               7999*********************************9999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF020423.5E-102766IPR003035RWP-RK domain
Gene3DG3DSA:1.10.10.603.9E-43463IPR009057Homeodomain-like
SuperFamilySSF542777.85E-8105160No hitNo description
PfamPF005642.6E-5110160IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2407.5E-10111160No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MNKGKKAIVI NYNARSKVKR DTTEIELSRE DIEQHYGKTM KKAAEELGVS LSTLKRKHNK  60
LGMPGWQGPD LPQRKACNSN RNQSKESHTH EKDNGVIQDP SPVKRNENTV IKAEYADDII  120
KIHLSVSEAT FVTVENEIGK KFKLKNGSFH IKYLDEDEEW
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021982441.14e-40uncharacterized protein LOC110878445
TrEMBLA0A1B0T6W31e-88A0A1B0T6W3_CHRMO; NIN-like protein (Fragment)
TrEMBLA0A2U1KBP15e-95A0A2U1KBP1_ARTAN; NIN-like protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.13e-09NIN like protein 7