PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan010025 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | ERF | ||||||||
Protein Properties | Length: 171aa MW: 19182.5 Da PI: 10.0352 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.1 | 2.9e-20 | 30 | 79 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae Aa+a+++a+ +++g Aan010025 30 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFETAEAAARAYDKAAIEFRG 79 59*******.**********94....36************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.63E-24 | 29 | 87 | No hit | No description |
Pfam | PF00847 | 3.9E-14 | 30 | 79 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.3E-38 | 30 | 93 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 25.211 | 30 | 87 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-32 | 30 | 87 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.57E-22 | 30 | 88 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 3.7E-12 | 31 | 42 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.7E-12 | 53 | 69 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence Send to blast |
XCLGCKLFSD DMNLNYNGGV GGPIKKKKKN YRGVRQRPWG KWAAEIRDPR KAARVWLGTF 60 ETAEAAARAY DKAAIEFRGP RAKLNFAFSD YATSTLPENS QPVVVAPTNS RRSTNRKVNT 120 KVVKETKPIV ENDFLGTIGE GDIQEWMMMM MDFKFNDDSS DSTFSGNVHS V |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 1e-23 | 27 | 86 | 2 | 62 | ATERF1 |
3gcc_A | 1e-23 | 27 | 86 | 2 | 62 | ATERF1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024960311.1 | 2e-63 | ethylene-responsive transcription factor ERF109-like | ||||
TrEMBL | A0A118K136 | 5e-62 | A0A118K136_CYNCS; AP2/ERF domain-containing protein | ||||
STRING | Solyc01g108240.2.1 | 9e-46 | (Solanum lycopersicum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 1e-24 | redox responsive transcription factor 1 |