PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan009750 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | C2H2 | ||||||||||||
Protein Properties | Length: 178aa MW: 20124.9 Da PI: 8.2481 | ||||||||||||
Description | C2H2 family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.8 | 0.0015 | 47 | 69 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H Aan009750 47 FECKTCNRQFPSFQALGGHRASH 69 89**********99999998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 1.92E-7 | 45 | 117 | No hit | No description |
Pfam | PF13912 | 2.9E-13 | 46 | 71 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.16 | 47 | 69 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.827 | 47 | 74 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 49 | 69 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 1.2E-9 | 94 | 119 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.25 | 95 | 117 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.265 | 95 | 122 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 97 | 117 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence Send to blast |
MVCIPMKRSR GDEFDTTINS MANYLMLLSR GNTNMDSYQD DSVSRVFECK TCNRQFPSFQ 60 ALGGHRASHK KPRLVDGDMT SHHHDSTLLI KPKTHKCSIC GLEFAIGQAL GGHMRRHRAA 120 TTTENHASLP LDLSTPVVKK VNSRRVFSLD LNLTPLENDF EFRVDDEKVT PITVDFFL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024980369.1 | 1e-104 | zinc finger protein ZAT11-like | ||||
TrEMBL | H2ERN9 | 1e-129 | H2ERN9_CHRMO; Cys2/His2-type zinc finger protein | ||||
STRING | XP_009593204.1 | 3e-64 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28710.1 | 1e-44 | C2H2 family protein |