PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan008700 | ||||||||||||
Common Name | ERF7 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | ERF | ||||||||||||
Protein Properties | Length: 208aa MW: 23167.3 Da PI: 6.6363 | ||||||||||||
Description | ERF family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 40 | 9.9e-13 | 53 | 101 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s++kGV + +grW A+I++ ++r++lg+f + eAaka++ a ++++g Aan008700 53 SKFKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNEEHEAAKAYDTAVQRFRG 101 79****9888.8*********3.....5**********99************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.02E-25 | 53 | 108 | No hit | No description |
Pfam | PF00847 | 1.4E-7 | 53 | 101 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.96E-16 | 53 | 109 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 5.9E-20 | 54 | 110 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.3E-28 | 54 | 115 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.19 | 54 | 109 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:2.40.330.10 | 1.3E-10 | 174 | 205 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.24E-7 | 176 | 206 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 5.65E-8 | 177 | 207 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence Send to blast |
MEGSSTDDQS TTTESTSTVV APVTTPQLIG SGGSMVLDME GGLEAESRKL PSSKFKGVVP 60 QPNGRWGAQI YEKHQRVWLG TFNEEHEAAK AYDTAVQRFR GRDAVTNFKQ LSLDNEEASL 120 EASFLNSHSK AEIVDMLRKH TYNDEFEQSK RSCSLKTSPF SDGFRSGHQL VNAREQLFEK 180 TVTPSDVGKL NRLVIPKXHA EKHFPLQX |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Aan.20307 | 0.0 | trichome |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in all tissues examined: Roots, rosette leaves, cauline leaves, inflorescence stems, flowers and siliques. Highest expression in roots and rosette leaves. Very low expression in flowers. {ECO:0000269|PubMed:9862967}. | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in leaves. {ECO:0000269|PubMed:18718758}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds specifically to bipartite recognition sequences composed of two unrelated motifs, 5'-CAACA-3' and 5'-CACCTG-3'. May function as negative regulator of plant growth and development. {ECO:0000269|PubMed:15040885, ECO:0000269|PubMed:9862967}. | |||||
UniProt | Transcriptional repressor of flowering time on long day plants. Acts directly on FT expression by binding 5'-CAACA-3' and 5'-CACCTG-3 sequences. Functionally redundant with TEM2. {ECO:0000269|PubMed:18718758}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Down-regulated by brassinosteroid and zeatin. {ECO:0000269|PubMed:15040885}. | |||||
UniProt | INDUCTION: Expressed with a circadian rhythm showing a peak at dawn. {ECO:0000269|PubMed:18718758}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024990296.1 | 1e-127 | AP2/ERF and B3 domain-containing transcription repressor TEM1-like | ||||
Swissprot | Q9C6M5 | 8e-88 | RAVL1_ARATH; AP2/ERF and B3 domain-containing transcription repressor TEM1 | ||||
Swissprot | Q9ZWM9 | 7e-88 | RAV1_ARATH; AP2/ERF and B3 domain-containing transcription factor RAV1 | ||||
TrEMBL | M4IXV5 | 1e-150 | M4IXV5_ARTAN; Ethylene-responsive transcription factor 7 | ||||
STRING | Aquca_002_01106.1 | 1e-94 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13260.1 | 1e-86 | related to ABI3/VP1 1 |