PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan008326 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | Nin-like | ||||||||
Protein Properties | Length: 221aa MW: 23715.3 Da PI: 9.595 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 94.5 | 7.3e-30 | 117 | 168 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk +gvc+T+LKriCRq+GI+RWP+Rki+++ Aan008326 117 AEKNVSLSVLQQYFSGSLKDAAKAIGVCPTTLKRICRQHGISRWPSRKINKV 168 589***********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.268 | 101 | 188 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 6.2E-27 | 120 | 168 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
VXLPASMKGS TEQQLLLNNL SSTMQRICKS LRTVSDAELS GVGGSDVGLQ RGLDESRLPL 60 ELSSSGTEQK YMEESSTPGD QVSGNATDST DIMIGARPPD QTAGGSRRQS EEKRSTAEKN 120 VSLSVLQQYF SGSLKDAAKA IGVCPTTLKR ICRQHGISRW PSRKINKVNR SLKKIQTVLD 180 SVQGVEGGLK FDPTTGGLVA ANTVIQDLDA QKVQRFPITA X |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024995704.1 | 1e-122 | protein NLP9-like isoform X1 | ||||
Refseq | XP_024995706.1 | 1e-122 | protein NLP9-like isoform X1 | ||||
Refseq | XP_024995708.1 | 1e-122 | protein NLP9-like isoform X3 | ||||
Refseq | XP_024995709.1 | 1e-123 | protein NLP9-like isoform X4 | ||||
Swissprot | Q9M1B0 | 1e-67 | NLP9_ARATH; Protein NLP9 | ||||
TrEMBL | A0A2U1KK07 | 1e-139 | A0A2U1KK07_ARTAN; NIN-like protein | ||||
STRING | XP_004289276.1 | 8e-87 | (Fragaria vesca) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59580.2 | 5e-70 | Nin-like family protein |