PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan008153
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 226aa    MW: 25116.1 Da    PI: 7.1116
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41929263PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42.1e-192171256
        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
               +y+GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+ +l+g+
  Aan008153 21 RYRGVRKRP-WGRFAAEIRDpWK----KARVWLGTFDSAEDAARAYDAAAVSLRGA 71
               59*******.**********883....5*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.4E-342184IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-312179IPR001471AP2/ERF domain
CDDcd000186.59E-202180No hitNo description
PROSITE profilePS5103223.8542178IPR001471AP2/ERF domain
SuperFamilySSF541712.55E-222180IPR016177DNA-binding domain
PfamPF008472.7E-122170IPR001471AP2/ERF domain
PRINTSPR003671.3E-102233IPR001471AP2/ERF domain
PRINTSPR003671.3E-104460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MAKKSTAGEP IGSRPVGSEI RYRGVRKRPW GRFAAEIRDP WKKARVWLGT FDSAEDAARA  60
YDAAAVSLRG AKAKTNFPVS HQVPEFYIDN HKQKQDGLYK LQHVNSHDVI INQARPTASS  120
LSSTVESTSG PRVSYANHRP VQIKKAAPDD DCHSNCDSSS SVVDDEYFSS SRQPLPFDLN  180
FPPPVDEIAT GEDSGDLFVT ALCLQFFYKS TDLPLDVICN FLVYFL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A9e-232279361ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A9e-232279664ATERF1
3gcc_A9e-232279664ATERF1
5wx9_A2e-221283477Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.206470.0trichome
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021989430.19e-73ethylene-responsive transcription factor 3-like
SwissprotQ9SXS85e-37ERF3_TOBAC; Ethylene-responsive transcription factor 3
TrEMBLA0A2U1PGY31e-145A0A2U1PGY3_ARTAN; Ethylene-responsive transcription factor 3
STRINGPGSC0003DMT4000373592e-49(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.15e-23ethylene responsive element binding factor 3