PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan008053
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 230aa    MW: 26087.9 Da    PI: 7.1188
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55204780PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-101849PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.78.9e-1684134256
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                 y+GVr++  +g+WvAeIr p     +   r +lg+f+ a +Aa a+++ + kl+g+
  Aan008053  84 LYRGVRQRQ-WGKWVAEIRLP-----HsrSRRWLGTFDNAHQAALAYDHEAFKLRGN 134
                59****999.**********7.....335999**********************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.34E-3083143No hitNo description
SuperFamilySSF541715.36E-2184142IPR016177DNA-binding domain
PROSITE profilePS5103221.58884141IPR001471AP2/ERF domain
SMARTSM003801.7E-3284147IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.7E-3084142IPR001471AP2/ERF domain
PfamPF008472.4E-885133IPR001471AP2/ERF domain
PRINTSPR003672.1E-128596IPR001471AP2/ERF domain
PRINTSPR003672.1E-12123143IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MADLAEISSS SGKNKGKAVC QHKKIKRPEQ QHSHSKFVFP FSLDDDPKSM SQSQSSKKQH  60
MISFRSENKE TEGHLHNQQP VPKLYRGVRQ RQWGKWVAEI RLPHSRSRRW LGTFDNAHQA  120
ALAYDHEAFK LRGNKARLNF PDLFIKDEKQ IPAPSLEPCV EQEVKPLLND SHGSSEQAGP  180
CNDEGHSVFD TSESLFQDPA WESLEDGVSN ASQGGSSFIW DNFEPSFFNP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-1883141160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023756358.13e-75ethylene-responsive transcription factor ERF071-like
TrEMBLA0A2U1PJ141e-155A0A2U1PJ14_ARTAN; DNA-binding domain-containing protein
STRINGGorai.012G130600.15e-35(Gossypium raimondii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.13e-31ERF family protein