PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan007738 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | WRKY | ||||||||||||
Protein Properties | Length: 239aa MW: 28021.9 Da PI: 4.4975 | ||||||||||||
Description | WRKY family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 90.7 | 1.1e-28 | 39 | 96 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YY+C+++ +C++kk+ve +++d ++++itY+++Hnh+ Aan007738 39 DSWSWRKYGQKPIKGSPHPRGYYKCSTSkSCTAKKQVEICRTDSSMLIITYTSTHNHP 96 99***********************9988****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.2E-29 | 29 | 98 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 8.76E-25 | 35 | 98 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.3E-32 | 37 | 97 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.034 | 39 | 98 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.1E-23 | 39 | 96 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MDDFQASKKR KVGEKIVVKV KLEENEGKKK SDQNHPSCDS WSWRKYGQKP IKGSPHPRGY 60 YKCSTSKSCT AKKQVEICRT DSSMLIITYT STHNHPNPTN SKQTKNDAKS EISTTPEPDQ 120 EYEEEEKPVE PDQEYEEEKP PVEPDHEYEE EKPPVVTLDN DDFRYIQTPE EETHLTINLE 180 NTYFYDEPLM YPDLMNFSSL KTEENDFYDE LEELPMSSST FKSFMRSNFF EERVLVQPS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 2e-19 | 39 | 99 | 18 | 80 | Disease resistance protein RRS1 |
5w3x_D | 2e-19 | 39 | 99 | 18 | 80 | Disease resistance protein RRS1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021987700.1 | 1e-111 | probable WRKY transcription factor 65 | ||||
TrEMBL | A0A2U1KQ42 | 1e-166 | A0A2U1KQ42_ARTAN; WRKY domain-containing protein | ||||
STRING | VIT_07s0005g01520.t01 | 4e-70 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.2 | 8e-29 | WRKY DNA-binding protein 69 |