PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan007702
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Dof
Protein Properties Length: 240aa    MW: 27091.4 Da    PI: 8.7986
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55193662PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof117.64.7e-373189462
     zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
               +++kcprC+s ntkfCyynny+lsqPr++Ck+CrryWtkGG lrnvPvGgg rk k+ss
  Aan007702 31 HNTKCPRCESLNTKFCYYNNYNLSQPRHYCKNCRRYWTKGGVLRNVPVGGGIRKTKRSS 89
               5689***************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027014.5E-323287IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.5283387IPR003851Zinc finger, Dof-type
ProDomPD0074782.0E-233483IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103571IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
XEPNKCKIIH PINTQGGIGR FFTGDANQQF HNTKCPRCES LNTKFCYYNN YNLSQPRHYC  60
KNCRRYWTKG GVLRNVPVGG GIRKTKRSSK PKSKTKTNTS ITSSSTVEHK SSNSGHSSNA  120
SSSHAATTNT NKTDVSSNST QGMMLSFNQV TNDDQVTLNQ SKQSSSQDMG MFQTHQENEI  180
QWTDAHFKMP EIRSSSMFIN PSDEGLFDLT GTVNDDLSFW NQSQWNNAED QDHHQLNYLP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024973233.14e-50dof zinc finger protein DOF5.4-like
TrEMBLA0A2U1MRY51e-112A0A2U1MRY5_ARTAN; Zinc finger, Dof-type
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60850.17e-31OBF binding protein 4