PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aan007224 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | Dof | ||||||||
Protein Properties | Length: 255aa MW: 28301.2 Da PI: 10.131 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 126 | 1.2e-39 | 30 | 90 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCds ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ + Aan007224 30 PHEALKCPRCDSLNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRIK 90 57899*****************************************************875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 4.2E-34 | 32 | 88 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 2.0E-27 | 32 | 88 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.413 | 34 | 88 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 36 | 72 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MAAPGVRVME KPMQLQQHQQ QQQQQQPPPP HEALKCPRCD SLNTKFCYYN NYSLSQPRHF 60 CKACKRYWTR GGTLRNVPVG GGCRKNKRIK RPITTTTTTL PVAATLSQAN HRTNQNHSPN 120 PNLDHNHIPP STTSNSTSNH HLNPMFYGLL PQNPSYPRFD TRVSNVNENL VSGYDLIQTH 180 MNANGLGFSS TGTGVSSLET NHGHNSNINF SSYLNNSSMY GGGSTSSSTS APTIASLLTS 240 SINQQQRYMG FARYX |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022035990.1 | 1e-109 | dof zinc finger protein DOF1.4-like | ||||
TrEMBL | A0A142IXE2 | 1e-151 | A0A142IXE2_CHRMO; DOF transcription factor 9 (Fragment) | ||||
STRING | VIT_10s0003g00040.t01 | 6e-60 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28310.1 | 9e-36 | Dof family protein |