PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan006790
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 269aa    MW: 30276.2 Da    PI: 6.7643
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-35617PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-18102152155
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                ++y+GVr+++ +g+++AeIrdp     +  r +lg+f taeeAa  +++a+ +l+g
  Aan006790 102 KKYRGVRRRP-WGKYAAEIRDPI----KrIRLWLGTFNTAEEAAMVYDQAAIQLRG 152
                59********.**********73....34*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.79E-31102159No hitNo description
Gene3DG3DSA:3.30.730.104.9E-29103159IPR001471AP2/ERF domain
SMARTSM003803.2E-35103166IPR001471AP2/ERF domain
PROSITE profilePS5103222.537103160IPR001471AP2/ERF domain
PfamPF008471.6E-11103152IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-21103160IPR016177DNA-binding domain
PRINTSPR003675.9E-10104115IPR001471AP2/ERF domain
PRINTSPR003675.9E-10126142IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
DDTNTNTTTL VKKTIHKKNT FKLTTNSPTP KLVRISLTDT YATDTDNDDD ETTNISCRKR  60
VKKFVHEVTI QPECPKPAFV VVKEMKKKTE RKPLKALTNN NKKYRGVRRR PWGKYAAEIR  120
DPIKRIRLWL GTFNTAEEAA MVYDQAAIQL RGPHALTNFV IPTTPPELKP EPSCSSGVNS  180
GDEMSSGISN NKMTSPKSVL RGFDSLTEGA GLGGEVGCLE IFRPFDEDFL NGDLFEFGKL  240
DEFNFDLMTS PSTVCERFDD FNTDDFLCD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A9e-23102159159ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024996904.14e-60ethylene-responsive transcription factor CRF1-like
TrEMBLA0A2U1MG821e-173A0A2U1MG82_ARTAN; Cytokinin response factor 6
STRINGcassava4.1_025181m2e-49(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.21e-39cytokinin response factor 2