PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan006074
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family WRKY
Protein Properties Length: 311aa    MW: 34701.8 Da    PI: 5.202
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S48378558PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-183160990PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.18.7e-29129190159
                ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                +dDgy+WrKYGqK++ g++fprsYYrCt++   +C ++k+v+r++ +p+v++itY+g+H+++
  Aan006074 129 VDDGYSWRKYGQKDILGAKFPRSYYRCTYRkaeKCLATKQVQRTDANPTVFDITYKGKHTCN 190
                59***************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081121.379124187IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-26126190IPR003657WRKY domain
SuperFamilySSF1182901.57E-24128191IPR003657WRKY domain
SMARTSM007743.7E-39129191IPR003657WRKY domain
PfamPF031067.2E-27130189IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MESVCVYGQK TLINELSQGI QMAKQLKVNL NSPEAREILI QKILASYDNA LFVFKSGESA  60
GQCGPNGFPA FSLTESAITI ASPQSVRSEC NQPFSNEQGP NAVSKKRKGS TICEDQVKMC  120
TDDGLEGSVD DGYSWRKYGQ KDILGAKFPR SYYRCTYRKA EKCLATKQVQ RTDANPTVFD  180
ITYKGKHTCN HHARLAEPPL PEKHEINTTH HQELPRPNPG GMLSNLRANL TVNTSDFGAT  240
DPYSFSFPLE PFGTIEDYQQ LHLPNDFDDE LLQVYSPPVI SPGTSDLNCY TDWDSSQSLN  300
FTADLDLDFK F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-171281911376Disease resistance protein RRS1
5w3x_D2e-171281911376Disease resistance protein RRS1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021972772.11e-121probable WRKY transcription factor 41
TrEMBLB6VGE00.0B6VGE0_ARTAN; WRKY transcription factor 1
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.12e-47WRKY family protein