PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan005826

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

TALE

Protein Properties

Length: 332aa MW: 37677.4 Da PI: 8.6916

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-156424	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.8	5.1e-10	167	199	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yps +++ LA+++gLt +qV++WF N R + Aan005826 167 HPYPSDADKHMLATQTGLTRNQVSNWFINARVR 199 89*****************************98 PP
2	BELL	103.5	1.5e-33	19	87	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e q+kkakLl +++eV++rYkqy +q+q+vissFe+vagl +a+pY+ lAlka+SrhF +k+ i+eq+ Aan005826 19 EFQRKKAKLLYMQDEVCRRYKQYLQQMQMVISSFETVAGLSAATPYVCLALKAVSRHFHLVKNVISEQL 87 89*****************************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00574	2.0E-15	1	85	IPR006563	POX domain
Pfam	PF07526	1.6E-29	15	84	IPR006563	POX domain
PROSITE profile	PS50071	12.05	140	203	IPR001356	Homeobox domain
CDD	cd00086	1.94E-11	143	204	No hit	No description
SMART	SM00389	1.8E-9	143	207	IPR001356	Homeobox domain
SuperFamily	SSF46689	1.92E-17	144	209	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	3.9E-28	146	207	IPR009057	Homeodomain-like
Pfam	PF05920	1.1E-18	160	199	IPR008422	Homeobox KN domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence Send to blast
XEDHISGRSS SGADSFRPEF QRKKAKLLYM QDEVCRRYKQ YLQQMQMVIS SFETVAGLSA 60 ATPYVCLALK AVSRHFHLVK NVISEQLSQM RKMVGEGLCS STTTSSKAFD PNATSTSHLK 120 SMDQRLGKYG GAAGYFSSQQ PAWRPQRGLP ERAISVLKTW LFDHFLHPYP SDADKHMLAT 180 QTGLTRNQVS NWFINARVRI WKPMVEEIHT LETKGLTEQN LTNPQSECQD PSRMDISSLS 240 NTQHPECSRH TVVTVDGPYD QLRDHEKLAR PEYQIPLSNM DRLMSFMPYP QATFDATRLG 300 PVSLTLGLRQ NAEHVQQLQQ HFGGQLIHDF VG

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3k2a_A	9e-16	149	207	5	63	Homeobox protein Meis2
3k2a_B	9e-16	149	207	5	63	Homeobox protein Meis2
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022005831.1	0.0	BEL1-like homeodomain protein 8
TrEMBL	A0A2U1P0J3	0.0	A0A2U1P0J3_ARTAN; TALE protein
STRING	XP_009615825.1	1e-111	(Nicotiana tomentosiformis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	2e-75	BEL1-like homeodomain 8