PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan005642
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family WRKY
Protein Properties Length: 352aa    MW: 39363.3 Da    PI: 9.3938
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-432160993PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.91.5e-21111167259
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                dD y+WrKYGqK+vk+   +r+YY+C++  C +kk  e  ++ ++v++i+Y+g+H+h+
  Aan005642 111 DDSYTWRKYGQKQVKSPGSSRGYYKCSYGACDAKK-FESYDQFNSVIKIVYKGQHKHD 167
                8********************************99.9*9999***************7 PP
2WRKY89.43.1e-28247304259
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 Dgy+WrKYGqK+vkg+++pr+YY+C +agCpv+k++e   +  + v+itY+g Hnh+
  Aan005642 247 ADGYRWRKYGQKMVKGTPHPRNYYKCIFAGCPVRKHIENVVNGSSEVTITYKGLHNHD 304
                6********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-19100169IPR003657WRKY domain
PROSITE profilePS5081117.259105169IPR003657WRKY domain
SuperFamilySSF1182903.53E-18106169IPR003657WRKY domain
SMARTSM007741.0E-15110168IPR003657WRKY domain
PfamPF031069.3E-16111167IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.2E-30231306IPR003657WRKY domain
SuperFamilySSF1182901.24E-25240306IPR003657WRKY domain
PROSITE profilePS5081129.562241306IPR003657WRKY domain
SMARTSM007741.1E-30246305IPR003657WRKY domain
PfamPF031061.0E-21248304IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MDDNDDNTTA HPTSLVISAD LSEVPLIYDV RQDELDRFKN HLQGSHQDAL ATIIAQAHSE  60
SEIKSSPTGL SVMPVTLSPE VQIHKEKLTW HKXNEEETAD LKSLPAVQTP DDSYTWRKYG  120
QKQVKSPGSS RGYYKCSYGA CDAKKFESYD QFNSVIKIVY KGQHKHDPPK KVIPKGDEML  180
STPESLKRKT TSTSGLKENQ SSGCAPIQIV HIDDSLVKPR PRYEYVPKHP KKPKFSVQAA  240
ADIEISADGY RWRKYGQKMV KGTPHPRNYY KCIFAGCPVR KHIENVVNGS SEVTITYKGL  300
HNHDMPVPRK GQGPPSDALI TAVSSAFKNI SQPTRRESAP TLLSIGFKIK QC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-23236307778Probable WRKY transcription factor 4
2lex_A2e-23236307778Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024968177.11e-124probable WRKY transcription factor 32
SwissprotP595832e-66WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLA0A2U1L2G50.0A0A2U1L2G5_ARTAN; DNA-binding WRKY
STRINGSolyc07g005650.2.14e-70(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.18e-69WRKY DNA-binding protein 32