PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan005595

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Nin-like

Protein Properties

Length: 356aa MW: 39511.4 Da PI: 8.9688

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-115526	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	94.6	6.9e-30	163	213	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+i+le+l++yF++++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rkik++ Aan005595 163 EKTITLEMLRQYFAGSLKDAAKHLGVCPTTLKRICRQHGIQRWPSRKIKKV 213 79***********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.268	146	233	IPR003035	RWP-RK domain
Pfam	PF02042	6.2E-27	165	213	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence Send to blast
XEHHLLKGQG VVGRAFKTNQ PCYFPDVKLM TKTEYPLSHH ARIFNLCGVV AIRLRSTFTA 60 NVDYVLEFFL PVDCTDEEEQ KSLLNSLSVI IQNVCRSLRI VTDKELLEEA TGKVELVPKV 120 EEILTDITMD LIKQTNESGS GGGSLVTDNI KRPERRRGGS KTEKTITLEM LRQYFAGSLK 180 DAAKHLGVCP TTLKRICRQH GIQRWPSRKI KKVGHSLQKI QLVMDSVHGA SGSFQIESFY 240 SNFPNLASPD PKTNPKFQQL VDSKPIEGVT KLSVSPSSSQ TSSSGQSSSS GTHPYPHPRT 300 PTGEDIGSGA LKRARSDAEL HVSLYSQDQD PEQEPKVFQR SHSHKSLTEL PTTLPX

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence Send to blast

XEHHLLKGQG VVGRAFKTNQ PCYFPDVKLM TKTEYPLSHH ARIFNLCGVV AIRLRSTFTA  60
NVDYVLEFFL PVDCTDEEEQ KSLLNSLSVI IQNVCRSLRI VTDKELLEEA TGKVELVPKV  120
EEILTDITMD LIKQTNESGS GGGSLVTDNI KRPERRRGGS KTEKTITLEM LRQYFAGSLK  180
DAAKHLGVCP TTLKRICRQH GIQRWPSRKI KKVGHSLQKI QLVMDSVHGA SGSFQIESFY  240
SNFPNLASPD PKTNPKFQQL VDSKPIEGVT KLSVSPSSSQ TSSSGQSSSS GTHPYPHPRT  300
PTGEDIGSGA LKRARSDAEL HVSLYSQDQD PEQEPKVFQR SHSHKSLTEL PTTLPX

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024968727.1	1e-177	protein NLP2-like
Swissprot	Q9SFW8	5e-85	NLP5_ARATH; Protein NLP5
TrEMBL	A0A2U1MQS0	0.0	A0A2U1MQS0_ARTAN; Plant regulator RWP-RK family protein
STRING	XP_010692542.1	1e-100	(Beta vulgaris)
STRING	XP_009759077.1	1e-100	(Nicotiana sylvestris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	4e-87	Nin-like family protein