PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan005441

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Nin-like

Protein Properties

Length: 375aa MW: 41322.2 Da PI: 5.4199

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-40847	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	21.7	4e-07	187	222	10	45
RWP-RK 10 lskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 l yF l+ AAkeL + + +CR+ GI+ WP Aan005441 187 LVPYFGLSSVVAAKELRLKKGTFRNTCRKAGIPEWP 222 5679******************************** PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.30.450.40	2.6E-5	64	137	IPR029016	GAF domain-like
SuperFamily	SSF55781	2.06E-5	65	138	IPR029016	GAF domain-like

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence Send to blast
XKSTIKTLPL YGHNVLIQFW AATKIGKTVL LTTTGQPFGL SGNNKELELY RQGCLDHKLY 60 VHPEKRIAVG LPGRVFLNST PEQTQNVHNI PSDQRPPCVD ATIYSRTWGS FAVPVIVDGQ 120 CVGVIDFVTD TPTHSFDSII GKVYKALQQA GLQSSIKTDC PKTCVSLDSK IRIRRTQSFS 180 LSYYFRLVPY FGLSSVVAAK ELRLKKGTFR NTCRKAGIPE WPGLPSTNTR ASSAPDQTQV 240 NQTVSETRSV GTLQVDDSVS SRDEGISPTP VSSPSENRMN QTVSETSPNP DDFNSCWDGG 300 VYEGPLELFM PTNASAIETE ISKIASDTSF TEALLNQQHD GIEYPGIETT AIEDSNHYMF 360 MESLDTIFED APMMI

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence Send to blast

XKSTIKTLPL YGHNVLIQFW AATKIGKTVL LTTTGQPFGL SGNNKELELY RQGCLDHKLY  60
VHPEKRIAVG LPGRVFLNST PEQTQNVHNI PSDQRPPCVD ATIYSRTWGS FAVPVIVDGQ  120
CVGVIDFVTD TPTHSFDSII GKVYKALQQA GLQSSIKTDC PKTCVSLDSK IRIRRTQSFS  180
LSYYFRLVPY FGLSSVVAAK ELRLKKGTFR NTCRKAGIPE WPGLPSTNTR ASSAPDQTQV  240
NQTVSETRSV GTLQVDDSVS SRDEGISPTP VSSPSENRMN QTVSETSPNP DDFNSCWDGG  300
VYEGPLELFM PTNASAIETE ISKIASDTSF TEALLNQQHD GIEYPGIETT AIEDSNHYMF  360
MESLDTIFED APMMI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2U1NX69	1e-165	A0A2U1NX69_ARTAN; RWP-RK domain-containing protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	1e-17	NIN like protein 7