PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Aan005382 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 384aa MW: 43210.9 Da PI: 10.0004 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 38.7 | 2e-12 | 129 | 171 | 3 | 45 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 +++++e ++k+ +pi +AAk+Lgv+ ++LKr CR + + WP Aan005382 129 DSLTMEAVNKHVGKPIDEAAKSLGVSRSTLKRFCRDHDMTSWP 171 689**************************************** PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 11.968 | 115 | 199 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.2E-12 | 130 | 171 | IPR003035 | RWP-RK domain |
Gene3D | G3DSA:1.10.10.60 | 3.2E-4 | 136 | 193 | IPR009057 | Homeodomain-like |
SuperFamily | SSF54277 | 5.23E-16 | 295 | 367 | No hit | No description |
Gene3D | G3DSA:3.10.20.240 | 1.9E-16 | 301 | 378 | No hit | No description |
PROSITE profile | PS51745 | 20.662 | 301 | 382 | IPR000270 | PB1 domain |
SMART | SM00666 | 4.7E-12 | 301 | 382 | IPR000270 | PB1 domain |
Pfam | PF00564 | 2.5E-14 | 302 | 367 | IPR000270 | PB1 domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 384 aa Download sequence Send to blast |
XREASIFLNT DPQSTIISST ITTKTKIPET VSSDSESFVA DLAKTDSTHV LNQLSPKQDF 60 LNNNGGTITS SAIVIQDDVI RDDIDVVGVG NDENAASNHD VSMQIASNTV TVTRETSNRM 120 KRGRKRKIDS LTMEAVNKHV GKPIDEAAKS LGVSRSTLKR FCRDHDMTSW PLPTKHNKKT 180 ARVTDSELSQ KSRSIQPLQG SSSVRFGFFD VVILLVRVKR WSCLSKNHGF SGKWWSCGKH 240 SYLPFKLDSM YQVARLMLSL KRWKNKNTIK RAMQNRDHLT DSTEKPKNET NIINPGSDIK 300 KVTVKATFKD DIIKFQLPTS SGLFELENEV AQRIKLQNKR VRLKYRDEDD DMILLACDAD 360 LHNLLGNSPS NNCIIKLSIQ LVDE |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_022020704.1 | 1e-122 | protein NLP7-like | ||||
TrEMBL | A0A2U1PDS3 | 0.0 | A0A2U1PDS3_ARTAN; NIN-like protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24020.1 | 2e-17 | NIN like protein 7 |