PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan005382
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Nin-like
Protein Properties Length: 384aa    MW: 43210.9 Da    PI: 10.0004
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-124765PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK38.72e-12129171345
     RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 
                +++++e ++k+  +pi +AAk+Lgv+ ++LKr CR + +  WP
  Aan005382 129 DSLTMEAVNKHVGKPIDEAAKSLGVSRSTLKRFCRDHDMTSWP 171
                689**************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151911.968115199IPR003035RWP-RK domain
PfamPF020422.2E-12130171IPR003035RWP-RK domain
Gene3DG3DSA:1.10.10.603.2E-4136193IPR009057Homeodomain-like
SuperFamilySSF542775.23E-16295367No hitNo description
Gene3DG3DSA:3.10.20.2401.9E-16301378No hitNo description
PROSITE profilePS5174520.662301382IPR000270PB1 domain
SMARTSM006664.7E-12301382IPR000270PB1 domain
PfamPF005642.5E-14302367IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
XREASIFLNT DPQSTIISST ITTKTKIPET VSSDSESFVA DLAKTDSTHV LNQLSPKQDF  60
LNNNGGTITS SAIVIQDDVI RDDIDVVGVG NDENAASNHD VSMQIASNTV TVTRETSNRM  120
KRGRKRKIDS LTMEAVNKHV GKPIDEAAKS LGVSRSTLKR FCRDHDMTSW PLPTKHNKKT  180
ARVTDSELSQ KSRSIQPLQG SSSVRFGFFD VVILLVRVKR WSCLSKNHGF SGKWWSCGKH  240
SYLPFKLDSM YQVARLMLSL KRWKNKNTIK RAMQNRDHLT DSTEKPKNET NIINPGSDIK  300
KVTVKATFKD DIIKFQLPTS SGLFELENEV AQRIKLQNKR VRLKYRDEDD DMILLACDAD  360
LHNLLGNSPS NNCIIKLSIQ LVDE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022020704.11e-122protein NLP7-like
TrEMBLA0A2U1PDS30.0A0A2U1PDS3_ARTAN; NIN-like protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.12e-17NIN like protein 7