PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan005344
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family WRKY
Protein Properties Length: 391aa    MW: 44603.8 Da    PI: 5.4198
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55136493PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.62.5e-28227284359
                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D ++WrKYGqK++kgs++pr+YY+C+++ +C++kk+ve +++d ++++itY+++Hnh+
  Aan005344 227 DSWSWRKYGQKPIKGSPHPRGYYKCSTSkSCTAKKQVEICRTDSSMLIITYTSTHNHP 284
                99***********************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF549804.03E-53385IPR009022Elongation factor G, III-V domain
Gene3DG3DSA:2.40.50.2508.5E-3455148No hitNo description
Gene3DG3DSA:2.20.25.802.9E-29217286IPR003657WRKY domain
SuperFamilySSF1182902.09E-24223286IPR003657WRKY domain
SMARTSM007741.3E-32225285IPR003657WRKY domain
PfamPF031062.4E-23227284IPR003657WRKY domain
PROSITE profilePS5081129.034227286IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
RVREKGTGKK VTEIQDTNSW TAWTEKCNSD SVSGKAILNT IFDSYGPWAG DMSTRDLGSL  60
IAFEDGTVTS YALASSQERG QLFIKPGAEV YKGQIVGIHQ RPGDLSLNVC KKKAATNVRS  120
NKEVSVVLDT PLDYSLDDCI EYIQEDELVE VTPKSIRMCK NPKLNKKGLE HKQKMSKKIF  180
DFISRLMGVD LPYASKKRKV GEKIVVKVKL EENEGKKKSD QNHPSCDSWS WRKYGQKPIK  240
GSPHPRGYYK CSTSKSCTAK KQVEICRTDS SMLIITYTST HNHPNPTNSK QTKNDAKSEI  300
STTPEPDQEY EEEEKPVEPD QEYEEEKHVE PDQEYEQEKP PIVTLENDDF RYIQTPEEET  360
HLMVNLENTF FDEEPLMYPD LVNFSSLKTE X
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3e3x_A3e-2733160187316BipA
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.12270.0leaf
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2U1N9F81e-129A0A2U1N9F8_ARTAN; WRKY domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.21e-27WRKY DNA-binding protein 69