PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan004102 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | ERF | ||||||||||||
Protein Properties | Length: 207aa MW: 23000.8 Da PI: 9.5481 | ||||||||||||
Description | ERF family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.9 | 8.3e-21 | 22 | 73 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a++ a+++++g+ Aan004102 22 PHFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDSAAREFRGA 73 689*******.**********8...557*************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.32E-32 | 22 | 81 | No hit | No description |
Pfam | PF00847 | 2.0E-14 | 22 | 72 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.3E-37 | 23 | 86 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.35E-22 | 23 | 81 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 23.749 | 23 | 80 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.2E-32 | 23 | 80 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.9E-11 | 24 | 35 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.9E-11 | 46 | 62 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence Send to blast |
MAPKQEKTTE NTNTLNGVTK EPHFRGVRKR PWGRYAAEIR DPGKKSRVWL GTFDTAEEAA 60 RAYDSAAREF RGAKAKTNFP IFEDDVLKQQ RSPSQTSTVD SDSHAVPLLD LNLSCANPAP 120 PPPPFVVQFP YHRRYPAVTV AGAGFYAPPA NHQVFYFDGV PRSNFVYKQS VTKSDDSNGS 180 SVVDVKPAPP PRRVEIDLNF PPAPELF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 1e-21 | 19 | 81 | 1 | 64 | ATERF1 |
3gcc_A | 1e-21 | 19 | 81 | 1 | 64 | ATERF1 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Aan.6091 | 0.0 | trichome |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022016243.1 | 3e-72 | ethylene-responsive transcription factor 11-like | ||||
TrEMBL | A0A2U1QDW3 | 1e-150 | A0A2U1QDW3_ARTAN; Erf domain protein 9 | ||||
STRING | Solyc10g009110.1.1 | 4e-49 | (Solanum lycopersicum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15210.1 | 3e-29 | ethylene responsive element binding factor 4 |