PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan003652 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | MYB_related | ||||||||||||
Protein Properties | Length: 247aa MW: 28017.6 Da PI: 10.7413 | ||||||||||||
Description | MYB_related family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.5 | 9.9e-11 | 47 | 81 | 3 | 39 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 +WT eE +++++a +++G++ Wk++a+++ +R ++ Aan003652 47 PWTDEEVDRFYKAYRKYGKE-WKKVAAMVR-TRNSEM 81 8*******************.********9.998776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 5.46E-11 | 43 | 91 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 3.8E-5 | 44 | 92 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 4.5E-7 | 46 | 82 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 3.21E-7 | 47 | 82 | No hit | No description |
Pfam | PF00249 | 4.1E-9 | 47 | 82 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence Send to blast |
MAPTRKSRSV NKRYSDYIDV SPSKFLPPTN KSTGRQKRKL SDMLGSPWTD EEVDRFYKAY 60 RKYGKEWKKV AAMVRTRNSE MVEALYTMNR AYLSLPEGTA SVVGFIAMVS DHYNALEGSD 120 NDQETKELPK TIHKAKKRSQ GLLQKNGGED HLQSRPVRSS DRRLPQLKIR ESDGCTVRKR 180 TPRFPINHSS RRDNGGSYVS PSKTNQKREV DDVAHGAAMA LTEALQRGGS PQVFQSPHRM 240 KTTPSRT |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Aan.20056 | 0.0 | trichome |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed ubiquitously in vegetative and reproductive tissues. {ECO:0000269|PubMed:15246533}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021993773.1 | 1e-133 | protein ALWAYS EARLY 2-like | ||||
Swissprot | Q6A332 | 3e-54 | ALY3_ARATH; Protein ALWAYS EARLY 3 | ||||
TrEMBL | A0A2U1MH48 | 1e-171 | A0A2U1MH48_ARTAN; Uncharacterized protein | ||||
STRING | Gorai.005G058900.1 | 2e-71 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 1e-56 | DNA binding |
Publications ? help Back to Top | |||
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