PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan003174
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 281aa    MW: 32075.1 Da    PI: 6.1594
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41958939PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-47552PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.3e-2091140255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+W+AeIrdp+   k +r++lg+f tae+Aa a+++a+++++g
  Aan003174  91 HYRGVRQRP-WGKWAAEIRDPN---KGARVWLGTFETAEGAALAYDQAALRFKG 140
                7********.**********93...25***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.0E-3390149IPR001471AP2/ERF domain
SMARTSM003801.3E-3891154IPR001471AP2/ERF domain
PfamPF008474.7E-1491140IPR001471AP2/ERF domain
SuperFamilySSF541713.27E-2291149IPR016177DNA-binding domain
PROSITE profilePS5103224.68491148IPR001471AP2/ERF domain
CDDcd000189.75E-3591149No hitNo description
PRINTSPR003673.3E-1192103IPR001471AP2/ERF domain
PRINTSPR003673.3E-11114130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MDNESFMDKQ IEDEHDLQTQ SQSSSYTNQW SNQPHQMVAT TTPRDDIYRG FVPEYSTLLP  60
PPSMMVIPQQ QQQIAPPTDN YRQQEPTVKR HYRGVRQRPW GKWAAEIRDP NKGARVWLGT  120
FETAEGAALA YDQAALRFKG SKAKLNFPER VQGRSELRYI TTTTTATTSP PQPPAATTPH  180
SQNPTPQQTI ATNYPDFLQY AQLLSSNNDA QFPYFTSTLY PHQQQYSEYV MNPSSSLMAG  240
SSTSSYDQQH YVDNPSLSSD SGSDQRVNWE HWKDVNDPNR K
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-2890151466ATERF1
3gcc_A2e-2890151466ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.85080.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023763827.13e-82ethylene-responsive transcription factor ERF113-like
TrEMBLA0A2U1P3H01e-178A0A2U1P3H0_ARTAN; DNA-binding domain-containing protein
STRINGXP_002512669.16e-52(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.14e-45related to AP2 6l