PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan002750 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | WRKY | ||||||||||||
Protein Properties | Length: 312aa MW: 34978.7 Da PI: 7.6206 | ||||||||||||
Description | WRKY family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 62.4 | 7.9e-20 | 246 | 303 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a + k + + +++tYeg+H h+ Aan002750 246 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAlVVQLESKFKDVL-MINNFDTTYEGTHSHP 303 7***************************95444444444444.567789*********7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 5.7E-20 | 230 | 305 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.05E-17 | 238 | 305 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 20.564 | 240 | 305 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.3E-17 | 245 | 304 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.9E-16 | 247 | 303 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence Send to blast |
XMGKDRWGLT FEPVKLLSPL SNSSVKATMY SSDTAASSPK PEDKNSHREV DFFSTCKSED 60 DHDVVVKKEN SHDNELDVNT GLHLLTTNSD QSSVDDGGSS TSEEKQAKNK LTILKAELEK 120 MNTENQRLRA MLTHVSNNYT ALQIHISNEI HKQQNQIAEQ NSRQLNELVR NSNDSLSEER 180 TQSGSIKHGD KIGKRNCREN TPDSDGWVSN KVSRLDASKN IDQPNESAMR KARVSVRARS 240 EAPMITDGCQ WRKYGQKMAK GNPCPRAYYR CTMALVVQLE SKFKDVLMIN NFDTTYEGTH 300 SHPLPPAAMA MA |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Roots, leaves, shoots, flowers and siliques. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in the control of processes related to senescence and pathogen defense (PubMed:12000796). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:12000796). Activates the transcription of the SIRK gene and represses its own expression and that of the WRKY42 genes (PubMed:12000796). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000269|PubMed:12000796, ECO:0000269|PubMed:25733771}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid, ethylene, jasmonic acid, pathogens, wounding and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024988376.1 | 1e-132 | WRKY transcription factor 6-like | ||||
Swissprot | Q9C519 | 2e-70 | WRKY6_ARATH; WRKY transcription factor 6 | ||||
TrEMBL | A0A2U1NJT3 | 0.0 | A0A2U1NJT3_ARTAN; WRKY1 | ||||
STRING | EOY28756 | 1e-82 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 6e-66 | WRKY family protein |