PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan002712
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family SRS
Protein Properties Length: 315aa    MW: 35747.1 Da    PI: 8.8181
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41949343PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-646160988PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70223.51.6e-071044640
     DUF702  6 asCqdCGnqakkdCaheRCRtCCksrgfdCathvk 40
                +C+ CGn a+  C ++ C+ CC      C+ hv 
  Aan002712 10 PKCKYCGNVARSRCPFQACKNCCAKEQNLCHIHVL 44
               68*******************************94 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF051421.4E-51145IPR007818Protein of unknown function DUF702
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
XGLNACLNKP KCKYCGNVAR SRCPFQACKN CCAKEQNLCH IHVLKGNPAV PDKLPSSSSP  60
SVDQQSKEIS SSGNAYRGAT YQKFSSKFSQ FNNLHPVRAK KPLTIKEASQ INEWRFLKLK  120
EYKERNIEIE NEAFDRYLHN ITLLEDVFAV NSNLEEPAKD DLEGKCETLI SELKMKLRAD  180
PVRTENFRDR MRFTVNNALR KLKSETPTGN EETELVNRPK KARYASLVEL NKKLNNARTD  240
EDVKSCKLLK AQLFNQSDNK AEQSENIKTP DQHDGKPEQK SGSSLSNWFS TITIDQGELS  300
HIDAQFSSLK AIENL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024984921.11e-157uncharacterized protein LOC112520690
TrEMBLA0A2U1L1X70.0A0A2U1L1X7_ARTAN; Uncharacterized protein
STRINGXP_009786844.11e-100(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32730.17e-67