PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan002662
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family WRKY
Protein Properties Length: 319aa    MW: 34695.1 Da    PI: 10.3817
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41947824PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-147237PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.25.3e-31247304359
                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYe+eHnh+
  Aan002662 247 DDYSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPTMLIVTYESEHNHS 304
                99************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105339.0E-17198243IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.806.4E-33234304IPR003657WRKY domain
PROSITE profilePS5081130.274240306IPR003657WRKY domain
SuperFamilySSF1182901.24E-26242304IPR003657WRKY domain
SMARTSM007743.3E-37245305IPR003657WRKY domain
PfamPF031061.4E-26247303IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
XNMEELAVRE AGAAGLQSLE HLIGLLSTHH HRKPSYPTTT TTVDYTAVAD VAVNKFKKFI  60
SLLDRSSTGH ARFRRGPISQ NQIPIQKKST LTPVPSPANI PATAPSSTPS MIQEKVFAPA  120
SIQQRVVKSG SFERKDAPTA TINFAGAAVV ASPATSFMSS LTGDTDGLQP SMSSGFQITN  180
MSQVSSAGQP NASNSSFKRK CNSVDDSHTK CTNSSGRCHC TKKRKSRMKR IVRVPAISLK  240
MADIPPDDYS WRKYGQKPIK GSPHPRGYYK CSSLRGCPAR KHVERALDDP TMLIVTYESE  300
HNHSLNLKDS SATIIFESS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-202433051576Probable WRKY transcription factor 4
2lex_A1e-202433051576Probable WRKY transcription factor 4
Search in ModeBase
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023728458.11e-167probable WRKY transcription factor 7
SwissprotQ9STX04e-89WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLA0A2U1N7K50.0A0A2U1N7K5_ARTAN; WRKY13
STRINGXP_009604893.11e-131(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.14e-84WRKY DNA-binding protein 7