PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Aan001690 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
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Family | Nin-like | ||||||||||||
Protein Properties | Length: 419aa MW: 45713.9 Da PI: 6.8829 | ||||||||||||
Description | Nin-like family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 92.1 | 4.1e-29 | 207 | 258 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l+++F++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ Aan001690 207 AEKSISLEVLQQHFAGSLKDAAKNLGVCPTTMKRICRQHGISRWPSRKINKV 258 589***********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 16.461 | 197 | 278 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 1.9E-26 | 211 | 258 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence Send to blast |
XSFDGSCMGQ VCMSTTDVAF YVVDAHMWGF REACAEHHLQ KGQGVAGRAF ETRSSCFCEN 60 ITHFSKTEYP LVHYARLFGL VASFAICLRS SHTGDDDYIL EFFLPPNMVD CKDQQTMLGS 120 LLTSMKQHFR SLTVASGEEI GEDGRMVEII KASVNGDVID SGLQSIRLSE SVISNGGPLI 180 LKQNTSNGKL ETVEPTTKKS ERKRGKAEKS ISLEVLQQHF AGSLKDAAKN LGVCPTTMKR 240 ICRQHGISRW PSRKINKVKP LTYQAKTVNE SVQGGEGTFT IPSLQTTQIP RGVDSPSWPP 300 APNGSPTNQQ GSPGSKTYEP TTSPKNEQGP TNQTSGSREA STGSPNSPNS HRSCQESQPY 360 EVKAPNPAVE FFVSDALLAA PQNEEPFRGM LIEDAGSSHD LTNLCPVAEP LERYKNLLX |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in roots, stems, leaves, flowers and siliques. Detected in root hairs, emerging secondary roots, vascular tissues, leaf parenchyma cells and stomata. {ECO:0000269|PubMed:18826430}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in regulation of nitrate assimilation and in transduction of the nitrate signal. {ECO:0000269|PubMed:18826430}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Not regulated by the N source or by nitrate. {ECO:0000269|PubMed:18826430}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021972605.1 | 0.0 | protein NLP7-like isoform X2 | ||||
Swissprot | Q84TH9 | 1e-117 | NLP7_ARATH; Protein NLP7 | ||||
TrEMBL | A0A2U1NHW0 | 0.0 | A0A2U1NHW0_ARTAN; NIN like protein 7 | ||||
STRING | XP_009803234.1 | 1e-143 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24020.1 | 1e-120 | NIN like protein 7 |