PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan000794
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Trihelix
Protein Properties Length: 344aa    MW: 38314.6 Da    PI: 6.2055
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41969886PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-128978PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix83.92.1e-2629123185
   trihelix   1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                rWt+qe l+Li+++r  e+r+rrg+           + +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e++ +s + +++  f  +
  Aan000794  29 RWTRQELLVLIQGKRVAENRVRRGRsavmafgsssaQVEPKWSSVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESQISSSK-KEIESFWVM 123
                8**********************977777788888899*******************************************95554.456666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.472997IPR017877Myb-like domain
PfamPF138375.9E-1129123No hitNo description
Gene3DG3DSA:1.10.10.601.4E-52996IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MALERLSLVV HESAEEEQNS NSKAPRLPRW TRQELLVLIQ GKRVAENRVR RGRSAVMAFG  60
SSSAQVEPKW SSVSSYCKRH GVNRGPVQCR KRWSNLAGDF KKIKEWESQI SSSKKEIESF  120
WVMRNDLRRE RKLPGFFDRE VYDILDGGGG SSSSAAAAGK EVERDRSLVL SLAPTSAAND  180
NDDQEEAEET DKEVLFDSGR TAASDDGLFS DEPVIPTSPF DKLNKEQSAP APTPISATQY  240
VPFSQPRVPT TDDAAAADKE TSLSPETHQG KKRKRPATDD AGETSLQKQL IEAMERNGKL  300
LSTQLEIQNT NSQLDREQRK DHANSLFEVL NKLADAMVRI ADKL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.53050.0trichome
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023771802.11e-154trihelix transcription factor ASR3
SwissprotQ8VZ201e-98ASR3_ARATH; Trihelix transcription factor ASR3
TrEMBLA0A2J6KW471e-152A0A2J6KW47_LACSA; Uncharacterized protein
STRINGevm.model.supercontig_2461.11e-122(Carica papaya)
STRINGXP_010249232.11e-122(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-85Trihelix family protein
Publications ? help Back to Top
  1. Vidal EA, et al.
    Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots.
    BMC Genomics, 2013. 14: p. 701
    [PMID:24119003]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]