PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK43895.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family STAT
Protein Properties Length: 1147aa    MW: 130620 Da    PI: 5.8312
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK43895.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT187.31.9e-586938081115
        STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkk.ypfl 98 
                 l+vvl+na+gqpv+kdv+vvasLlyadsg++vek++d+e+pLL+sy+G+ef++ed+p++ll+G+ sfklkisqLssk+d+rLf+ikfeip++k  ypfl
  KFK43895.1 693 LEVVLSNAIGQPVHKDVKVVASLLYADSGTPVEKANDSEPPLLVSYEGIEFAAEDKPCNLLNGCVSFKLKISQLSSKSDKRLFCIKFEIPEVKGyYPFL 791
                 79*******************************************************************************************978*** PP

        STAT  99 eavskpirCisrsrntr 115
                 e+v+++irCisr+ ++ 
  KFK43895.1 792 ETVTNQIRCISRKCDSV 808
                 ************97765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF498991.0E-7497636IPR013320Concanavalin A-like lectin/glucanase domain
CDDcd103386.05E-6510421147No hitNo description
Gene3DG3DSA:3.30.505.103.4E-710491106IPR000980SH2 domain
SuperFamilySSF555502.7E-1010501138IPR000980SH2 domain
PROSITE profilePS500019.9310531147IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 1147 aa     Download sequence    Send to blast
MRNDSLRVAI ESWNQCNEVG EEAKNMGSPR MADCFDLDYS SSPVKINHKV DEKDNKLGVR  60
NGTYGGINAG DNVDTYAAQK EIYLGNKCQV MDSPNPWQFW MIMLKNGNTD TLAAICPENG  120
KKAKPFPRTG RFPCFGKGCM NMPSMHHEYT SFVDQEHMSG SFYGTWDLDS DVEDGSVVGN  180
NSYYKVKWEK KIGGNESWVF HHLLKTSSKY PWLMLYLRAD ATRGFSGGYH YDTRGMMKMS  240
LKSPNFKVTF KLEILKGGGS GSQFYLMDMG SCWKNDGRDC DGDVTTDVTR YSEMIINPES  300
TAVCNRNHLN ACPPYHAFPN GTKVDRRDKE RFPYEAYHYY CVPGNARFAE TPYDVCDPYS  360
NPQPQEILQI LPHSVWEEFG YPTKKGQGWI GDPRSWELDV GKLSQTLHFY QDPGTKPVER  420
HWSSIDLGTE IYMSKNQIAE WTVTDFDIVI PKTVFSFLLW VLRVQVLEMA SDCAINTDKY  480
CLLEDFNVDV QVENHEFETF SLCFWVYLLD STTYPCTIIR QVHSDMCVSA PFLVLDENKK  540
MMLLPLTLLH QEAPDPVNIS SWTEVPNVST KAEFPLQKWL HVGCQVSRNY MRLYICGEIV  600
GEQVLTSLMT NGTNSDCAQK ISLFSVGGDG YSVQGFIHGA QVLPSSLPVN YHYTKDPPLW  660
LSVENPSTSG IELDKDGVWN IVGGKAHRKI FSLEVVLSNA IGQPVHKDVK VVASLLYADS  720
GTPVEKANDS EPPLLVSYEG IEFAAEDKPC NLLNGCVSFK LKISQLSSKS DKRLFCIKFE  780
IPEVKGYYPF LETVTNQIRC ISRKCDSVTP KRLNHIDYPL DGREPEIASS NGTSDILHSS  840
SSTKRIRLGE EKIFESEFEN GNGTSMEWRH QNQDEEEDNS STDSENAQVR DSTAFRRYTI  900
SDSTIFRYCL GNLTERSLLL KEITNNSSDE QVSEFADQVC LYSGCSHHSY QIKMARKLIA  960
EGTNAWILIS RNYQHVHWDN VVIEIEEHFM RIAKCSSRSL THQDFELLRR ICGCYEYITQ  1020
ENFEKMWCWL FPVASAISRG LINGMWRSSS PKWIEGFVTK EEAEHSLQCQ EPGTFILRFP  1080
TSRSWPHPDS GSLVVTYVGR DFLIHHRLLK IDHICDSSER YKDAKPLQDM LLAEPELSRL  1140
GRIIRSI
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK43895.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1186310.0AK118631.1 Arabidopsis thaliana At1g17030 mRNA for unknown protein, complete cds, clone: RAFL19-90-A12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024008335.10.0SH2 domain-containing protein A
SwissprotB5X5610.0SHA_ARATH; SH2 domain-containing protein A
TrEMBLA0A087HP430.0A0A087HP43_ARAAL; Uncharacterized protein
STRINGA0A087HP430.0(Arabis alpina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM52052645
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17040.10.0SH2 domain protein A
Publications ? help Back to Top
  1. Yamada Y,Wang HY,Fukuzawa M,Barton GJ,Williams JG
    A new family of transcription factors.
    Development, 2008. 135(18): p. 3093-101
    [PMID:18701541]