PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK43756.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family WOX
Protein Properties Length: 271aa    MW: 32148.5 Da    PI: 6.9534
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK43756.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.53.1e-203997356
                --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
    Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                +R+++t+eq  +L+e++++ +r+p++++++e+A++l    +++ ++V++WFqN++ +e+
  KFK43756.1 39 SRWNPTPEQMMVLQEVYNSgTRTPTTQQIQEIASQLqkygRIEGKNVFYWFQNHKSRER 97
                7*****************99*************************************98 PP

2Wus_type_Homeobox110.96.8e-363899364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       ++RW+PtpeQ+++L+e+y+sG+rtP++++iq+i+++L++yG+ie+kNVfyWFQN+k+Rer k
         KFK43756.1 38 QSRWNPTPEQMMVLQEVYNSGTRTPTTQQIQEIASQLQKYGRIEGKNVFYWFQNHKSRERLK 99
                       79**********************************************************88 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003898.2E-536103IPR001356Homeobox domain
SuperFamilySSF466895.56E-123899IPR009057Homeodomain-like
CDDcd000863.59E-53897No hitNo description
PROSITE profilePS5007110.773899IPR001356Homeobox domain
PfamPF000467.5E-183997IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.604.3E-83997IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009965Biological Processleaf morphogenesis
GO:0016049Biological Processcell growth
GO:0048314Biological Processembryo sac morphogenesis
GO:0048446Biological Processpetal morphogenesis
GO:0048482Biological Processplant ovule morphogenesis
GO:0051301Biological Processcell division
GO:0048353Cellular Componentprimary endosperm nucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MGYNKDQNVT PLPLLLYSTN YTTSHARPHC DEQIITGQSR WNPTPEQMMV LQEVYNSGTR  60
TPTTQQIQEI ASQLQKYGRI EGKNVFYWFQ NHKSRERLKR RRHNQQESFG FNNVHEERLP  120
NKENVVALGN KNSSVLRRRG DHRLIHTVTC LSSSSTHTQN NNIDDDGKME EYDHGRMEEE  180
KEATCQNQIN RINTFYHLNI TSKEREASFN EHKYNLNEEE EETRKSRTLD LFPVRDNQVK  240
TDATSLEEKN TKPDHLCCNY YYYYEFMPLM N
Cis-element ? help Back to Top
SourceLink
PlantRegMapKFK43756.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024008066.11e-117WUSCHEL-related homeobox 6
TrEMBLA0A087HNQ40.0A0A087HNQ4_ARAAL; Uncharacterized protein
STRINGA0A087HNQ40.0(Arabis alpina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM133691828
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01500.12e-42WOX family protein