 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
KFK42564.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
|
| Family |
bHLH |
| Protein Properties |
Length: 479aa MW: 54236.2 Da PI: 4.9411 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KFK42564.1 | genome | MPIPBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 13.4 | 0.00014 | 327 | 360 | 17 | 55 |
HHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 17 NsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+++f+ L++++P+ + ++K +iL +++Y+++L+
KFK42564.1 327 KEKFSVLKSMVPTvN------EVDKESILSNTIKYLQELE 360
689**********55......8***************995 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 479 aa
Download sequence Send
to blast |
MSSIMADDVE ASRNIRLREQ LAVAVRSLQW SYAIFWSPSL IQNGGLEWGE GYYNGETKRR 60
KNKSYEAESE YGVHRSKQLR NLYLCMLEGN TTHGHDDDDN NTSGNVMLSP DDLSDEEWYY 120
LVCMSYVFSP AQCLPGKALA NGETIWLCNA QHSESKLFTR SLLARSASIQ TVVCFPYLGG 180
VIELGVTDLI AEDHNLVQHI KECLLETSKS DSSEMKISEG NSKLEELKDE DLVYKKTLSN 240
VVGFSANISK RKDLDSSDSG SSFLRWKSSS LPSNKNHQKK MHSNVLWKIL HDVPLMHSAD 300
AKQTETTGLN QCVSMDHDDD SSDNKEKEKF SVLKSMVPTV NEVDKESILS NTIKYLQELE 360
ARVEELESRI TQPTIKENII SEIIEESSET EQGMVRDERN VRVKLKESEV LIEVRCLYRD 420
YIVADIMEAM SNLNMDAFSI RSSNEDGFLL LNLKAKFRGA VVTSVGMIKR ELKRVTCDI
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 4rqw_A | 9e-14 | 17 | 204 | 9 | 192 | Transcription factor MYC3 |
| 4rqw_B | 9e-14 | 17 | 204 | 9 | 192 | Transcription factor MYC3 |
| 4rru_A | 9e-14 | 17 | 200 | 48 | 227 | Transcription factor MYC3 |
| 4rs9_A | 9e-14 | 17 | 204 | 9 | 192 | Transcription factor MYC3 |
| 4ywc_A | 9e-14 | 17 | 200 | 48 | 227 | Transcription factor MYC3 |
| 4ywc_B | 9e-14 | 17 | 200 | 48 | 227 | Transcription factor MYC3 |
| 4yz6_A | 9e-14 | 17 | 204 | 9 | 192 | Transcription factor MYC3 |
| 5t0f_A | 9e-14 | 17 | 200 | 9 | 188 | Transcription factor MYC3 |
| 5t0q_A | 9e-14 | 17 | 200 | 9 | 188 | Transcription factor MYC3 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Trancsription activator, when associated with MYB75/PAP1 or MYB90/PAP2. {ECO:0000269|PubMed:15361138}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By cold, UV, flagellin, jasmonic acid (JA), and salicylic acid (SA) treatments. {ECO:0000269|PubMed:12679534}. |
