PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KFK39710.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
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Family | G2-like | ||||||||
Protein Properties | Length: 291aa MW: 31705.7 Da PI: 6.7838 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 107.1 | 9.4e-34 | 37 | 91 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl KFK39710.1 37 KPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRL 91 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.0E-32 | 34 | 93 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 11.938 | 34 | 94 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 5.55E-17 | 36 | 92 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 6.7E-24 | 37 | 92 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.0E-8 | 39 | 89 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.1E-26 | 135 | 181 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010628 | Biological Process | positive regulation of gene expression | ||||
GO:0016036 | Biological Process | cellular response to phosphate starvation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence Send to blast |
MYSAIRSLPL DGGDYHGPLD GTNLPGDACL VLTTDPKPRL RWTAELHERF VDAVTQLGGP 60 DKATPKTIMR TMGVKGLTLY HLKSHLQKFR LGRQACKEST DNSKDASCVG ESQDTGSSSS 120 SSLRIAAQEQ NESYQVTEAL RAQMEVQRRL HEQLEVQRRL QLRIEAQGKY LQSILEKACK 180 AFDDQAVAFD GLEAAREELS ELAIKVSNGS QGTTVPFFDA TKMMIMPSLS ELAVAVDNKN 240 NITTNCSVES SLTSATNGSS ISAASMKKRH RGDNVGVGYE AGWFMPSSTI G |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 1e-19 | 37 | 93 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-19 | 37 | 93 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-19 | 37 | 93 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-19 | 37 | 93 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00378 | DAP | Transfer from AT3G24120 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KFK39710.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY050355 | 0.0 | AY050355.1 Arabidopsis thaliana AT3g24120/MUJ8_3 mRNA, complete cds. | |||
GenBank | AY088428 | 0.0 | AY088428.1 Arabidopsis thaliana clone 6626 mRNA, complete sequence. | |||
GenBank | AY094046 | 0.0 | AY094046.1 Arabidopsis thaliana AT3g24120/MUJ8_3 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_566744.1 | 0.0 | Homeodomain-like superfamily protein | ||||
Swissprot | Q94A57 | 0.0 | PHL2_ARATH; Protein PHR1-LIKE 2 | ||||
TrEMBL | A0A087HC58 | 0.0 | A0A087HC58_ARAAL; Uncharacterized protein | ||||
STRING | A0A087HC59 | 0.0 | (Arabis alpina) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24120.1 | 0.0 | G2-like family protein |
Publications ? help Back to Top | |||
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